Gene Information

Name : A458_06100 (A458_06100)
Accession : YP_006456889.1
Strain : Pseudomonas stutzeri CCUG 29243
Genome accession: NC_018028
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1347703 - 1347921 bp
Length : 219 bp
Strand : +
Note : COG3311 Predicted transcriptional regulator

DNA sequence :
ATGTCTTCGCAGACCATCGCGCCGGCCTTGCCGCCCGAGCACCGCGTCCTGCGCCGCGCCGAGGTCGAAGCCAAGACCGG
CTTCAAGCGCGCGCACATCTACAGCCTCATGAAGGAAGGCAAGTTCCCCAAGGCGCTGCGCCTGGGCGTGCGCGCGGTGG
GCTGGGACTCGGTGGAGATCGAACAGTGGATCGCCGATCGCCTCAAAGAACGCGCCTGA

Protein sequence :
MSSQTIAPALPPEHRVLRRAEVEAKTGFKRAHIYSLMKEGKFPKALRLGVRAVGWDSVEIEQWIADRLKERA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 4e-24 73
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 5e-21 68
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 1e-07 46
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-10 44
unnamed CAA21398.1 - Not tested HPI Protein 1e-10 44
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 4e-09 43
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 4e-08 41
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 41
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 6e-08 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A458_06100 YP_006456889.1 phage transcriptional regulator AlpA VFG1118 Protein 2e-08 41