Gene Information

Name : Mycch_4834 (Mycch_4834)
Accession : YP_006455208.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5077327 - 5078772 bp
Length : 1446 bp
Strand : -
Note : PFAM: Catalase; Catalase-related immune-responsive

DNA sequence :
ATGACCGAGAACTACGCCACGACCGACGCCGGGGCGCCGATCCCCACCGTCGAGCACTCCCTGACCGTCGGGCCTGACGG
CCCCATCCTGCTGCAGGACCACTACCTCATCGAGCAGATGGCCAACTTCAACCGGGAACGCATCCCGGAGCGCCAGCCGC
ACGCCAAGGGCGGCGGCGCGTTCGGTCAGTTCGAGGTGACGCAGGACGTCAGTGCGTACACCAAGGCAGCGTTCCTGCAG
CCGGGCGTCAAGACGGAGATGGTCGCCCGGTTCTCCACGGTGGCGGGAGAGCGGGGCAGCCCAGACACCTGGCGGGACCC
GCGCGGTTTCGCGCTGAAGTTCTACACGTCGGAGGGCAACTTCGACATGGTCGGCAACAACACGCCGGTGTTCTTCGTGC
GCGACCCGATGAAGTTCCAGAACTTCATCCGCAGCCAGAAGCGCATGCAGGCAACCAATCTGCGCGACCACAACATGCAG
TGGGACTTCTGGACGCTCTCGCCCGAGTCGGCGCACCAGGTGACGTGGTTGATGGGCGACCGGGGCATCCCGAAGACCTG
GCGGCACATGAACGGCTACTCCAGCCACACGTACAGCTGGCTCAACGCCAACGACGAGATGTTCTGGGTGAAGTACCACT
TCAAGACCGACCAGGGCATCGACTACCTGACCCAGGAGGACGCCGACCGGCTGGCCGGTGAGGACGCCGACTACCACCAG
CGCGACCTGTACACGGCGATCGAGGAGGGCAACTTGCCGTCCTGGACGCTGCACGTGCAGATCATGCCGTTCGAGGACGC
CAAGACCTACCGGTTCAACCCGTTCGACCTGACCAAGGTGTGGCCGCACAGCGACTACCCCCTGCACGAGGTCGGCAAGA
TGACGCTGAACCGCAACGTCGTGGACTACCACGCTCAGATCGAGCAGGCGGCGTTCGAGCCCAATAACATCGTGCCGGGA
ACCGGTCTGAGCCCCGATAAGATGCTGCTGGCGCGTGGGTTCTCCTACTCGGACGCGCACCGTCACCGGCTCGGAGTGAA
CTACAAGCAGATTCCCGTCAACGAGCCGAAGGTGGAGGTCCGCGCCTACTCCAAGGACGGGCCGATGCGGATCCGCAACG
TCACCGACCCGATCTACGCGCCGAACTCGATGGGCGGTCCGGAGGCCGACCCGCGCCGTGCGTCCGAGGTGCACTGGGCG
TCCGACGGGGACATGGTCCGCTCGGCCTACGCGCTGCGGGCCGAGGACTCGGACTGGGGCCAAGCCGGGACGCTGGTGCG
CGACGTCCTCGACGATGCGGCCCGAGATCGCTTGGTGCACAACATCGTCGGTCACGTGTCGGACGGGGTGAAGGAGCCGG
TGCTGTCCCGGGTGTTCGAGTACTGGAAGAACGTGGACGCCGACCTCGGCAAACGGGTCGAGGAGGGCGTGCGCAACGGG
AGTTAG

Protein sequence :
MTENYATTDAGAPIPTVEHSLTVGPDGPILLQDHYLIEQMANFNRERIPERQPHAKGGGAFGQFEVTQDVSAYTKAAFLQ
PGVKTEMVARFSTVAGERGSPDTWRDPRGFALKFYTSEGNFDMVGNNTPVFFVRDPMKFQNFIRSQKRMQATNLRDHNMQ
WDFWTLSPESAHQVTWLMGDRGIPKTWRHMNGYSSHTYSWLNANDEMFWVKYHFKTDQGIDYLTQEDADRLAGEDADYHQ
RDLYTAIEEGNLPSWTLHVQIMPFEDAKTYRFNPFDLTKVWPHSDYPLHEVGKMTLNRNVVDYHAQIEQAAFEPNNIVPG
TGLSPDKMLLARGFSYSDAHRHRLGVNYKQIPVNEPKVEVRAYSKDGPMRIRNVTDPIYAPNSMGGPEADPRRASEVHWA
SDGDMVRSAYALRAEDSDWGQAGTLVRDVLDDAARDRLVHNIVGHVSDGVKEPVLSRVFEYWKNVDADLGKRVEEGVRNG
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA YP_005126717.1 catalase Not tested Not named Protein 9e-117 53
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 4e-113 52
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 4e-113 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 4e-113 52
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 4e-113 52
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 4e-99 52