|
Name : Mycch_4708 (Mycch_4708) Accession : YP_006455088.1 Strain : Mycobacterium chubuense NBB4 Genome accession: NC_018027 Putative virulence/resistance : Virulence Product : ATPase with chaperone activity, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 4949527 - 4952070 bp Length : 2544 bp Strand : - Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA) DNA sequence : ATGTTCGAAAGATTCACCGACCGTGCGCGTCGGGTTGTCGTGCTGGCCCAAGAAGAGGCCAGGATGCTCAACCACAACTA CATCGGCACCGAGCACATCCTGCTGGGACTCATTCACGAGGGTGAGGGCGTGGCCGCCAAATCACTCGAGTCGCTGGGCA TCTCCCTAGAGGGTGTGCGCAGCCAGGTCGAGGAGATCATCGGTCAGGGCCAGCAGGCGCCGTCCGGTCACATCCCCTTC ACCCCGCGCGCCAAGAAGGTGCTGGAACTGAGCCTGCGCGAGGCGCTGCAGCTCGGCCACAACTACATCGGCACCGAGCA CATCCTCCTCGGGTTGATCCGCGAGGGCGAGGGCGTGGCCGCCCAGGTGCTCGTCAAGCTCGGCGCCGAGCTGACCCGGG TGCGGCAGCAGGTCATCCAGCTGTTGAGCGGATACCAGGGCAAGGAGACCGCCGAAGCCGGCAGCGGCGGGCGCGGCGGC GAGGCGGGCAACCCGTCCACGTCGCTGGTGCTCGATCAGTTCGGCCGCAACCTGACCGCCGCCGCGATGGAGGGCAAGCT CGACCCCGTCATCGGCCGCGAGAAGGAAATCGAGCGGGTCATGCAGGTGCTGAGCCGCCGCACCAAGAACAACCCGGTGC TGATCGGTGAGCCCGGTGTCGGCAAGACCGCCGTCGTCGAGGGGCTCGCGCAGGCGATCGTGCACGGTGACGTGCCGGAG ACGCTCAAGGACAAGCAGCTCTACACCCTCGATCTGGGTTCGCTGGTCGCCGGCAGCCGCTACCGCGGTGACTTCGAGGA GCGCCTGAAGAAGGTGCTCAAGGAGATCAACACCCGCGGCGACATCATCCTGTTCATCGACGAGCTGCACACGCTCGTCG GCGCAGGTGCCGCCGAGGGCGCGATCGACGCCGCCAGCATCCTGAAGCCGAAGCTGGCCCGCGGCGAGCTGCAGACCATC GGCGCGACCACGCTCGACGAATACCGCAAGTACATCGAGAAGGACGCCGCGCTGGAGCGCCGGTTCCAGCCGGTGCAGGT CGGCGAGCCGACGGTCGCGCACACCATCGAGATCCTCAAGGGCCTGCGGGACCGCTACGAGGCGCACCACCGCGTGTCGA TCACCGACGGCGCCATCGCCGCGGCCGCGACGCTGGCCGACCGCTACATCAACGACCGGTTCCTGCCGGACAAGGCGATC GACCTGATCGACGAGGCCGGTGCGCGGATGCGCATCCGCCGGATGACCGCGCCGCCGGACCTGCGCGAGTTCGACGAGAA GATCGCCGACGCCCGCCGGGAGAAGGAGTCCGCGATCGACGCGCAGGACTTCGAGAAGGCCGCGAGCCTGCGCGACAAGG AGAAGCAGCTCGTCGCGCAGCGTGCCGAGCGTGAGAAGCAATGGCGCTCAGGTGATCTCGATGTCGTGGCCGAGGTCGAC GACGAGCAGATCGCCGAGGTGCTCGGCAACTGGACCGGCATCCCGGTGTTCAAGCTGACCGAGGAGGAGACCACCCGTCT GCTCCGCATGGAGGACGAGCTGCACAAGCGGATCATCGGCCAGGAGGACGCCGTCAAGGCCGTCTCCAAGGCGATCCGCC GCACCCGCGCCGGGCTGAAGGACCCCAAGCGTCCGTCGGGCTCGTTCATCTTCGCCGGCCCGTCCGGCGTCGGTAAGACC GAGCTGTCCAAGGCGCTGGCGAACTTCCTGTTCGGCGACGACGACGCACTGATCCAGATCGACATGGGCGAGTTCCACGA CCGCTTCACCGCGTCGCGGCTGTTCGGTGCCCCTCCGGGCTACGTCGGCTACGAAGAGGGCGGCCAGCTCACCGAGAAGG TGCGGCGTAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAGAAGGCCCACCAGGAGATCTACAACAGCCTCCTGCAG GTGCTCGAGGACGGCCGTCTGACCGACGGCCAGGGTCGCACGGTGGACTTCAAGAACACGGTGCTGATCTTCACGTCCAA CCTAGGGACCTCCGACATCTCCAAGGCGGTCGGCCTGGGCTTCACCCAGGGCGGCGGCGAGAACAACTACGAGCGGATGA AGCAGAAGGTCAACGACGAGCTGAAGAAGCACTTCCGCCCGGAGTTCCTCAACCGCATCGACGACATCATCGTGTTCCAC CAGCTGACGCAGGACGAGATCATCAAGATGGTCGACCTGATGATCGGCCGGGTCGGCAATCAGTTGCGGGCCAAGGACAT GACGATGGAGCTGACGGACCGGGCCAAGGCTCTGCTGGCCAAGCGCGGCTTCGATCCGGTGCTGGGCGCCCGCCCGCTGC GCCGGACGATCCAGCGTGAGATCGAGGACCAGCTCTCGGAGAAGATCCTGTTCGAGGAGGTCGGTCCCGGGCAGCTCGTC ACCGTCGACGTCGAGAACTGGGACGGCGAAGGTGCCGGCGAGGACGCGGTGTTCACGTTCACCGGCAGGCGTAAGCCCGC CGTGAGCGCGGAGCCGGACCTGGCTCAGGCCGGAGCCGCCGGAACGCCGAGCGCCGCCGAGTAA Protein sequence : MFERFTDRARRVVVLAQEEARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQGQQAPSGHIPF TPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRVRQQVIQLLSGYQGKETAEAGSGGRGG EAGNPSTSLVLDQFGRNLTAAAMEGKLDPVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGDVPE TLKDKQLYTLDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGAIDAASILKPKLARGELQTI GATTLDEYRKYIEKDAALERRFQPVQVGEPTVAHTIEILKGLRDRYEAHHRVSITDGAIAAAATLADRYINDRFLPDKAI DLIDEAGARMRIRRMTAPPDLREFDEKIADARREKESAIDAQDFEKAASLRDKEKQLVAQRAEREKQWRSGDLDVVAEVD DEQIAEVLGNWTGIPVFKLTEEETTRLLRMEDELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKT ELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEGGQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQ VLEDGRLTDGQGRTVDFKNTVLIFTSNLGTSDISKAVGLGFTQGGGENNYERMKQKVNDELKKHFRPEFLNRIDDIIVFH QLTQDEIIKMVDLMIGRVGNQLRAKDMTMELTDRAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFEEVGPGQLV TVDVENWDGEGAGEDAVFTFTGRRKPAVSAEPDLAQAGAAGTPSAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 82 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mycch_4708 | YP_006455088.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0079 | Protein | 0.0 | 60 |
| Mycch_4708 | YP_006455088.1 | ATPase with chaperone activity, ATP-binding subunit | VFG0080 | Protein | 5e-143 | 51 |
