Gene Information

Name : Mycch_4535 (Mycch_4535)
Accession : YP_006454917.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4762974 - 4763684 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
GTGAGCGCGAAACCGGTACTGCAGCTCGATGGCGTGGGCAAGACCTACCGCAGGGGCGGTGAGCAGGTGCGCGTGCTCGT
CGACTTCGACTTCACCTTGCGCGCAGGCGAATTCGTCGTCGTGACCGGACCCTCGGGGGTCGGCAAGTCGACTCTTCTGC
ATGTCGCCGGCGGATTGGACGCTCCGGACAGCGGGACAGTGGCGGTCGCCGGACAGAACGTGTGGTCGATGAGCACCGCG
GCGCGTGCGGCGTTCCGGCGGCGCAATCTCGGGTTCGTGTTCCAGTTCTTCAATCTGGTGCCGATGCTGACGGCGATGGA
GAACGTGTCGCTGCCGCTGGTGCTCGACGGCGTGTCCGCGCGGTCTGCCGACGCCCGCGCCGAGAAGCTGCTGGAGCGGG
TCGGACTCGGCGACCGTGCTCGGCACCGGCCGGCCGAACTGTCGGGCGGGCAGATGCAGAGGGTCGCGGTGGCCCGTGCG
GTGGTGGCCCGGCCGTCCATCGTCCTTGCCGACGAGCCCACCGGGAATCTCGACAGCCGGTCGTCGACCGAGGTCTTGGA
CCTCCTTCGGTCCCTTTCGGACGAAGACGGCACCGCGGTCGTCATGGTGACGCACGACCATGCCGCGGCGCAGTACGGCT
CCCGCGAGCTGCACCTGGTCGACGGGCGTGCGTGTCCGGCTGATCCTCTTGCGCCCGTCGGCGAGTGGTGA

Protein sequence : 
MSAKPVLQLDGVGKTYRRGGEQVRVLVDFDFTLRAGEFVVVTGPSGVGKSTLLHVAGGLDAPDSGTVAVAGQNVWSMSTA
ARAAFRRRNLGFVFQFFNLVPMLTAMENVSLPLVLDGVSARSADARAEKLLERVGLGDRARHRPAELSGGQMQRVAVARA
VVARPSIVLADEPTGNLDSRSSTEVLDLLRSLSDEDGTAVVMVTHDHAAAQYGSRELHLVDGRACPADPLAPVGEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-28 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-28 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-22 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_4535 YP_006454917.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-36 48
Mycch_4535 YP_006454917.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 8e-39 45
Mycch_4535 YP_006454917.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 4e-38 45
Mycch_4535 YP_006454917.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 4e-41 43
Mycch_4535 YP_006454917.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-31 42