Gene Information

Name : Mycch_4083 (Mycch_4083)
Accession : YP_006454484.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase/cystathionine gamma-synthase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.1
Position : 4292593 - 4293774 bp
Length : 1182 bp
Strand : -
Note : PFAM: Cys/Met metabolism PLP-dependent enzyme

DNA sequence :
ATGAGCGAGCAGCGATCGGCGGCCGACCACTACCGGGCCTTTGGTATTGCCACCAAGGCGATCCACGCAGGTTACCGGCC
TGATCCGGCCACCGGCGTCGTCAACCCGCCCATCTACGCCAGTTCGACGTTCGCGCAGGACGGCGTCGGCGGCCTGCGCG
GCGGATACGAATACTCGCGCACCGGCAACCCGACCCGTTCGGCGCTGGAGGCCGCACTGGCCGCCGTCGAAGTCGCGTCG
TACGCGCGGGCGTTCAGCTCCGGGATGGCCGCGTCGGACTGTGCCCTGCGCGCGCTGCTGCGCCCGGGCGATCACGTGGT
GATCCCCGACGACGCTTACGGCGGCACCTTCCGGTTGATCGACAAGGTGTTCACGCGCTGGGGCGTCGACTACACCGCCG
TCGCGCTGTCCGACGTCGACGCCGTGCGCTCGGCTGTCACCGACCGCACGAAGCTGATCTGGGTCGAGACGCCGACCAAC
CCGCTGCTGACGATCGCCGACGTCGGCGCGATCGCGAGCCTGGCGGCGGAGAAGAAGGTGAAGGTGTTGGTGGACAACAC
CTTCGCCTCACCGGCGCTGCAGCAGCCACTGACCCTCGGCGCGGACATCGTGCTGCATTCGACGACGAAGTACATCGGTG
GGCACTCCGACGTGGTCGGCGGTGCACTGCTGACCAACGACGAGGCCCTCGACGATGCGTTCGGGTTCCTGCAGAACGGT
GCGGGCGCGGTGCCCGGACCCTTCGACGCCTACCTGACCATCCGCGGCCTCAAGACGCTGCCTCTGCGGATGCAGCGCCA
CAGCGAGAACGCCGCGTTGATCGCCGAGTTCCTCGACAGCCACCCCGCGGTCGGCACCGTGCTGTACCCCGGCCTGCCCA
CGCATCCGCAGCATGACGTCGCCGCCAGACAGATGAGCCGTTTCGGCGGCATGGTGTCGGTCCGGCTGCGCGGTGGACCG
CAGGCGGCGCGCGACTTCTGCGCCCGGACCGAGATCTTCATCCTCGCGGAGTCGCTCGGGGGCGTGGAGTCGCTGATCGA
GTACCCCGGCGCGATGACCCATGCCTCGACGGCGGGTTCGCAGCTGGAGGTGCCCGACGATCTGGTGCGGCTGTCGGTGG
GCATCGAGGACGCCGCCGACCTGCTCGGCGACGTGGAGCAGGCGCTCAGCTCACTGGCCTGA

Protein sequence :
MSEQRSAADHYRAFGIATKAIHAGYRPDPATGVVNPPIYASSTFAQDGVGGLRGGYEYSRTGNPTRSALEAALAAVEVAS
YARAFSSGMAASDCALRALLRPGDHVVIPDDAYGGTFRLIDKVFTRWGVDYTAVALSDVDAVRSAVTDRTKLIWVETPTN
PLLTIADVGAIASLAAEKKVKVLVDNTFASPALQQPLTLGADIVLHSTTKYIGGHSDVVGGALLTNDEALDDAFGFLQNG
AGAVPGPFDAYLTIRGLKTLPLRMQRHSENAALIAEFLDSHPAVGTVLYPGLPTHPQHDVAARQMSRFGGMVSVRLRGGP
QAARDFCARTEIFILAESLGGVESLIEYPGAMTHASTAGSQLEVPDDLVRLSVGIEDAADLLGDVEQALSSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-70 46
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-71 46
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 8e-52 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_4083 YP_006454484.1 cystathionine beta-lyase/cystathionine gamma-synthase BAC0207 Protein 2e-62 43