Gene Information

Name : Mycch_4036 (Mycch_4036)
Accession : YP_006454438.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4248638 - 4249741 bp
Length : 1104 bp
Strand : +
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein

DNA sequence :
ATGAGCGCCACGACCACTGATTCAGCAGTCGTGGAGAAGCTTTCGCTGCTCGACCGCTTCCTGCCGGTTTGGATCGGATT
GGCGATGGCGGCAGGCCTGCTCTTGGGCCGACTGGTGCCCGGACTGAACACCGCACTCGACAAGATCGAGATCGACGGCA
TCTCGCTGCCCATCGCTTTGGGTCTGCTGATCATGATGTACCCGGTACTGGCCAAGGTGCGCTACGACCGGCTCGACACG
GTCACCGGTGACCGCAAGCTGCTGGTGAGTTCACTGCTACTGAACTGGATTCTCGGCCCGGCGCTGATGTTCGCCTTGGC
CTGGCTGCTGTTGCCCGACCTGCCCGAGTACCGCACCGGGCTGATCATCGTGGGGCTCGCCCGCTGCATCGCGATGGTGA
TCATCTGGAACGACCTGGCGTGCGGGGACCGCGAAGCCGCCGCAGTGCTCGTCGCGCTGAACTCCATCTTTCAAGTCGTC
ATGTTCGCGGTTCTTGGCTGGTTCTACTTGTCGGTCCTGCCCGGCTGGCTCGGACTGGAACAGACGACCATCTCGACCTC
CCCGTGGCAGATCGCCAAATCGGTGCTGATCTTCCTGGGCATCCCATTGCTCGCGGGCTACCTGTCGCGGCGGCTGGGTG
AGCGCGCCAAGGGCCGCGCCTGGTACGAGCAGAACTTTCTTCCCCGAGTGGGGCCGTGGGCACTCTACGGCCTCCTGTTC
ACCATCGTCATTCTCTTCGCTTTGCAGGGAGATCAGATCACCAGCAGGCCCTGGGACGTCGCGCGCATCGCGCTACCCCT
GCTGGCCTACTTCGCCATCATGTGGGGCGGCGGCAACCTACTAGGTGCGGCACTGAAGCTGGGCTACGAGCGCACCACCA
CCCTGGCGTTCACCGCGGCAGGCAACAACTTCGAACTCGCCATCGCCGTGGCCATAGCGACCTACGGAGCGACCTCGGGC
CAAGCCCTCGCCGGGGTTGTTGGACCGCTTATCGAAGTTCCCGTGCTCGTCGCACTCGTCTACGTGTCACTGGCACTGCG
GCGCCGCTTCACCCGTCATACATCGCAGCACATTCCTTCCCCGTCGCGCTCAACACAGGAGTAA

Protein sequence :
MSATTTDSAVVEKLSLLDRFLPVWIGLAMAAGLLLGRLVPGLNTALDKIEIDGISLPIALGLLIMMYPVLAKVRYDRLDT
VTGDRKLLVSSLLLNWILGPALMFALAWLLLPDLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAAAVLVALNSIFQVV
MFAVLGWFYLSVLPGWLGLEQTTISTSPWQIAKSVLIFLGIPLLAGYLSRRLGERAKGRAWYEQNFLPRVGPWALYGLLF
TIVILFALQGDQITSRPWDVARIALPLLAYFAIMWGGGNLLGAALKLGYERTTTLAFTAAGNNFELAIAVAIATYGATSG
QALAGVVGPLIEVPVLVALVYVSLALRRRFTRHTSQHIPSPSRSTQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 7e-59 51
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-71 50
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-71 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_4036 YP_006454438.1 arsenical-resistance protein BAC0573 Protein 7e-75 52
Mycch_4036 YP_006454438.1 arsenical-resistance protein BAC0004 Protein 2e-58 44