|
Name : Mycch_3973 (Mycch_3973) Accession : YP_006454376.1 Strain : Mycobacterium chubuense NBB4 Genome accession: NC_018027 Putative virulence/resistance : Resistance Product : SSS sodium solute transporter Function : - COG functional category : - COG ID : - EC number : - Position : 4192661 - 4194292 bp Length : 1632 bp Strand : + Note : PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family DNA sequence : ATGACAACCGTGCTGGCGCAAGCCCAGACAGTCGGCAACCCGGTGGCCAACATCGGCATCTTCACCCTGTTCGTCGTCGT GACGATGGTGGTCGTGATCCGCGCCAGCAAGCGCAACGCCACCGCTAGCGAGTTCTTCACCGGCGGCCGCGGCTTCTCCG GCCCGCAGAACGGCATCGCGATCGCTGGCGACTACCTGTCGGCCGCGAGCTTCCTCGGCATCGCCGGCGCGATCGCCGTG TACGGCTACGACGGCTTCCTGTACTCCATCGGGTTCCTCGTCGCATGGCTCGTCGCGCTGCTGCTGGTCGCCGAACTACT GCGCAACACAGGCAAATTCACGATGGCCGATGTGTTGAGCTTCCGGCTCAGGCAACGGCCCGTGCGGCTGGCCGCGGCCA CGTCCACGCTGACGGTGTCGCTGTTCTACCTGCTGGCCCAGATGGCGGGCGCGGGCGGGTTGGTGGCGCTGCTCCTCGAC GTCAAGAGCAGAGGCGGACAGTCGATCGTCATCGCGGTCGTCGGTGTGCTGATGATCGTCTACGTCCTCGTCGGAGGCAT GAAGGGCACCACGTGGGTGCAGATCATCAAGGCGGTGCTGCTCATCGTCGGCGCCGCCCTGATGACCGTGATGGTGCTCG GCAAGTTCGGGCTGAACTTCTCGGAGATCCTCGGCTCGGCGCAGTCGGCGATCAGCGGCGCGACCACCGCGGGTGTCGCC GACCGTGACGTGCTCGCCCCCGGCGCCCAGTACGGCGGCTCGCTGACGTCGCAGGTGAACTTCGTGTCGCTGGCGCTGGC GCTGGTCCTGGGCACCGCCGGTCTGCCGCACGTGCTGATGCGGTTCTACACCGTGCCGACCGCCAAAGAGGCCCGGCGCA GCGTGGTGTGGGCCATCGCGCTCATCGGCGCCTTCTACCTCTTCACCCTCGTGCTGGGCTACGGCGCGGCCGCCCTCGTC GGCCCGGACCGCATCCTGGGCGCCGCGGGCGGAGTCAACTCGGCGGCACCGCTGCTGGCGTTCGAACTCGGCGGCGTGAT CCTGCTCGGGGTCATCTCCGCGGTGGCGTTCGCGACGATCCTGGCGGTCGTGGCCGGGCTGACCATCACCGCGTCGGCGT CCTTCGCCCATGACATCTACGCCAGCGTGATGAAACGTCACCAGGTGACCGAGGCCGAACAGGTCCGCGTCTCCCGCATC ACCGCCGTCGTGCTGGGCGTGTTCGCGATCGGCCTCGGCATCCTGGCCAACGGCCAGAACGTCGCGTTCCTGGTCGCGCT GGCCTTCGCGGTGGCCGCGTCGGCGAACCTGCCGACCATCGTGTACTCGCTGTACTGGAAGCGGTTCAACACCCGCGGCG CGCTGTGGAGCATGTACGGCGGCCTGATCTCGTGCATCGTGCTGATCGTGTTCTCTCCGGCGGTGTCGGGGTCGAAGACC GCGATGATCCCGGGCGCCGACTTCGCGTGGTTCCCGCTGGCCAACCCGGGCATTGTGTCGATCCCGCTGGCCTTCGTCCT CGGCGTCGTCGGCACGCTGACCTCCCCCGACCGCGGCGATCCGAAGGTGGCCGCCGAGATGGAGGTCCGCTCGCTCACCG GGATCGGGGCCGAGAAAGCAGTCGCGCACTAG Protein sequence : MTTVLAQAQTVGNPVANIGIFTLFVVVTMVVVIRASKRNATASEFFTGGRGFSGPQNGIAIAGDYLSAASFLGIAGAIAV YGYDGFLYSIGFLVAWLVALLLVAELLRNTGKFTMADVLSFRLRQRPVRLAAATSTLTVSLFYLLAQMAGAGGLVALLLD VKSRGGQSIVIAVVGVLMIVYVLVGGMKGTTWVQIIKAVLLIVGAALMTVMVLGKFGLNFSEILGSAQSAISGATTAGVA DRDVLAPGAQYGGSLTSQVNFVSLALALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIALIGAFYLFTLVLGYGAAALV GPDRILGAAGGVNSAAPLLAFELGGVILLGVISAVAFATILAVVAGLTITASASFAHDIYASVMKRHQVTEAEQVRVSRI TAVVLGVFAIGLGILANGQNVAFLVALAFAVAASANLPTIVYSLYWKRFNTRGALWSMYGGLISCIVLIVFSPAVSGSKT AMIPGADFAWFPLANPGIVSIPLAFVLGVVGTLTSPDRGDPKVAAEMEVRSLTGIGAEKAVAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 4e-108 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mycch_3973 | YP_006454376.1 | SSS sodium solute transporter | BAC0564 | Protein | 5e-54 | 46 |
| Mycch_3973 | YP_006454376.1 | SSS sodium solute transporter | BAC0570 | Protein | 7e-49 | 42 |
