Gene Information

Name : Mycch_3491 (Mycch_3491)
Accession : YP_006453907.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Unknown
Product : transposase, IS30 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3646725 - 3648113 bp
Length : 1389 bp
Strand : -
Note : PFAM: Integrase core domain; manually curated

DNA sequence :
ATGGGTTGTCGGGGTCCTGGTCGGGCGCGGTTGCCGGAGTCAGTGCGCGAGCGGTTCTGGGCGGCGGTGGCAGCAGGTCT
GTCGCCGACGGCGGCGGCCACGGTGGCCGGCGTGCACGGCGCGACAGGGCGTCATTGGGCCCAACAGGCTGGTTATCGAG
GTGAGTCGAAGCATTTCGGAATCCGGTACACAGCACAGCAGCGGGCGGTGTTCTGGACCGCGGTGAGATCGGCGGTGCCG
CCGGCACAGGCCGCGGTGGTCGCTGGCGTGTCGGAGGCCGCGGCCCGACGCTGGCTGCAACAGGCTGACCACGTGCCCAG
AACCCCGTTTCCCGCTGAGGCTGATCTCGTTGCAGAAAGTGAGCTGACCTCTCGGGTTCGTGCACCGTTGCGCTTCGTGG
AGCGGTGTCGGCTTGAGCAGCTGCTCGAACACGGCTACCCACCAGCACAGGCGGCAGCCTTGATGGGCCGTCATAAGGAC
ACCATCAACCGGGAGATCGCCCGGGGACAGACCCGCTCGGTGTATCGAGCCAGCATGGGCCAAGACGTGGCCGATGCCGC
CCGTAAGCGCCCCAAAGTGCGCAAGCTTGAGGCCAACCCTGGGCTGCGGGCCGAGGTTCTGCAACGCTTGGAGACACGCA
ACAGTCCCGAACAGATCGCGGGCCGGCTGCGTCAAGACTTCCCTGACGATCCGGAGATGTGGGTGTCACACGAGACGATC
TACCAAGCCGTCTACGTTCAACCCCGCGGCGAGTTGGCCAAAGAGTTGAAGTCGGCACTACGCACCGGCCGGATCAAGAG
AAAACCGCAGGGCCGCAATGAAATAGCCGATCGTAACCGGTTCAAGGCGGGCATGGTCGGCATCTCCGAGCGGCCCGCCG
AAGCCGACGATCGCGCTATCCCCGGCCACTGGGAGGGGGACCTGATCATGGGCGCGGGCAACACCAGCGCGATCGGCACC
CTGGTCGAGCGCACCACGGGGTTCGTGATGCTGCTACACCTGCCCGGTGATCACACCGCCACCACCGTCGCCGCAGCGAT
GACCGCCAAAGTCCCCGAGATACCCGCAATCCTGCGCCGTTCACTGACCTGGGACCAGGGCACCGAGATGGCGATGCACA
CCAACATCACCGAAGCCACCGGGCTACCGATCTACTTCTGCGACCCCCATAGTCCCTGGCAACGCGGCACCAACGAAAAC
ACCAACGGACTGCTACGCCAGTACTTCCCCAAAGGCACTGACCTTGCGTTCTGGGGACCGGGATTCCTCGACCAAGTCGC
CGCCGAACTCAACGCCCGACCCCGCAAACGACACAACTGGCGCACACCCGCCGAAGAACTCGACCGACTACTCTCAGATC
CGTCCACGTACGTTGCAGCGACAGCTTAG

Protein sequence :
MGCRGPGRARLPESVRERFWAAVAAGLSPTAAATVAGVHGATGRHWAQQAGYRGESKHFGIRYTAQQRAVFWTAVRSAVP
PAQAAVVAGVSEAAARRWLQQADHVPRTPFPAEADLVAESELTSRVRAPLRFVERCRLEQLLEHGYPPAQAAALMGRHKD
TINREIARGQTRSVYRASMGQDVADAARKRPKVRKLEANPGLRAEVLQRLETRNSPEQIAGRLRQDFPDDPEMWVSHETI
YQAVYVQPRGELAKELKSALRTGRIKRKPQGRNEIADRNRFKAGMVGISERPAEADDRAIPGHWEGDLIMGAGNTSAIGT
LVERTTGFVMLLHLPGDHTATTVAAAMTAKVPEIPAILRRSLTWDQGTEMAMHTNITEATGLPIYFCDPHSPWQRGTNEN
TNGLLRQYFPKGTDLAFWGPGFLDQVAAELNARPRKRHNWRTPAEELDRLLSDPSTYVAATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0764 NP_939135.1 transposase Not tested Not named Protein 2e-54 44
CDC7B_2034 YP_005163475.1 transposase-like protein Not tested Not named Protein 6e-54 43
CDC7B_2059 YP_005163500.1 transposase-like protein Not tested Not named Protein 7e-54 43