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Name : Mycch_3298 (Mycch_3298) Accession : YP_006453722.1 Strain : Mycobacterium chubuense NBB4 Genome accession: NC_018027 Putative virulence/resistance : Unknown Product : ATPase component of various ABC-type transport systems with duplicated ATPase domain Function : - COG functional category : - COG ID : - EC number : - Position : 3444872 - 3446482 bp Length : 1611 bp Strand : + Note : PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region DNA sequence : GTGACTGTGCTGAAGGTCTCGGACCTCGGTGTGAGCATCGGCGCCCGCACCATCGTCGACGCCGTGTCCTTCACGGTGGA CCGTGAGCAGACCGTCGGCATCGTCGGGGAATCCGGCTCCGGCAAGACGATGACCGTACTGGCAGCCACCGGCCTGCTCG ACGCTCCGGGAGCACGGGTCAGCGGATCCAGCACGCTGACGGCCGACTCCGCGGCGTCCGTGCAGTTGGTCGGCGCCTCA CCGAAAATGCTGCGCAGTGTGCACGGCGCGCGGATCGGGTTCGTGTTCCAAGACCCCGGCACCTCGCTGAACCCGCTGCT CACCCTCGAGCGTCAGATCACCGAATCGCTGCAGACGCATCGGAAGCTGACGCGCAGAGCGGCCACCTCGCGGGCGCTCG AACTGCTCGAGGCCGTCGGGCTCCCGGACCCGCAGACACGACTGCACGCCTACCCGCATCAGCTCTCCGGCGGGCAGCGG CAACGCGTGATGATCGCGATCGCCCTGGCCTGCGACCCCGAGCTGCTGATCGCCGACGAGCCCACCACCGCGCTGGACGT CACGACTCAGGCTCAGATCATCGAATTGGTCCGTGCGCTGCAACGCGATTTCGGCACCGCCGTGGTGTGGATCAGCCACG ACCTCGGCGTGATCGGCCAGGTGGCCGACGAGGTGACGGTCATGCGGGACGGGCTGACCGTCGAGCAGGCGACGATCCTC GAGGTGTTCGAGCGTCCACACGAGCAGTACACCCGCGACCTGCTCGCCTCCCGGCCGGTGCTCGACGGCTCCGGCCCGCC GGCGGTGGCCGACGCCGAAACGCTGTTGCGCGTCACAGAACTCGATGTCCGCTATGCGGTGACGACGCCGCTGGGCCGCA CCACCGTGCACGCGGTCGACAACGTCTCGTTCGAGATCCGCCGCGGGACCACGTTGGGCCTGGTCGGTGAATCCGGGTCG GGGAAGTCGACGGTCGCGGCGGCGCTGACGGGTTTGGCGACACCCGACCGTGGCACCGCGACCCTGGACGGCACGGACGT CTTCGGAGTCAGGGGGGCGGCGGCCAGGGCGCTGCGCCGCCGGATCGGGCTGGTGTTCCAGGATCCGTTCTCGTCGCTGA ATCCCCGTGCCCGCGTGGACTCCTCGATCTCCGAGCCACTGACGGTGCACAAGCTGGTGGACGGCAAGGCCGCGCGCGGT AAGCGTGTCGGCGAGCTGCTCGACCTCGTCGGGCTGCCCGCTGCGTTCGCGCACCGCTATCCGCACGAGCTCTCGGGTGG CCAGCGGCAGCGCGTGAGCATCGCCCGGGCGCTGGCCGCCGAACCGGAGCTGCTCATTCTCGACGAGGCGACGGCCTCGC TGGATGTGTCGGTGCAGGCGCGGGTCCTCGAACTGCTCGCCCGGCTGCAACGCGAACTGGGGCTGACGTACCTGCTGATC GGTCACGACCTCGCCGTGATCCGGCAGCTGAGCCACGACGTGCTGGTGATGCGTGACGGCGCCGTGGTGGAGAGCCGGCC GGCCGCCGACCTGTTCACCTCACCGCAGCACGAGTACACCCGGGCGCTGCTGGCCGCGGTGCCCCCGGTCACCCCGCGCG CCGCGGTCTGA Protein sequence : MTVLKVSDLGVSIGARTIVDAVSFTVDREQTVGIVGESGSGKTMTVLAATGLLDAPGARVSGSSTLTADSAASVQLVGAS PKMLRSVHGARIGFVFQDPGTSLNPLLTLERQITESLQTHRKLTRRAATSRALELLEAVGLPDPQTRLHAYPHQLSGGQR QRVMIAIALACDPELLIADEPTTALDVTTQAQIIELVRALQRDFGTAVVWISHDLGVIGQVADEVTVMRDGLTVEQATIL EVFERPHEQYTRDLLASRPVLDGSGPPAVADAETLLRVTELDVRYAVTTPLGRTTVHAVDNVSFEIRRGTTLGLVGESGS GKSTVAAALTGLATPDRGTATLDGTDVFGVRGAAARALRRRIGLVFQDPFSSLNPRARVDSSISEPLTVHKLVDGKAARG KRVGELLDLVGLPAAFAHRYPHELSGGQRQRVSIARALAAEPELLILDEATASLDVSVQARVLELLARLQRELGLTYLLI GHDLAVIRQLSHDVLVMRDGAVVESRPAADLFTSPQHEYTRALLAAVPPVTPRAAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-92 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-81 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-81 | 41 |
