Gene Information

Name : Mycch_3226 (Mycch_3226)
Accession : YP_006453653.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3368143 - 3369579 bp
Length : 1437 bp
Strand : +
Note : PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I

DNA sequence :
GTGGCAGAAAAGACGGCCGACGACATCATCAAGCTGATCAGGGACGAGAATGTCGAGTACGTCGACATTCGCTTCTGCGA
TCTGCCCGGCGTCGTCCAGCACTTCTCGATCCCGGCGTCGGCGTTCGACGAGAGCGTGTTCGAGGACGGTCTCGCATTCG
ACGGCTCGTCGGTGCGCGGCTTCCAGTCGATCCACGAGTCCGACATGATGCTGCTGCCCGACCCGGCCACCGCGCGCATC
GACCCGTTCCGTGCGGCCAAGACGCTGAACCTCAACTTCTTCGTGCACGACCCGTTCACGCGTGAGGCTTACTCTCGCGA
CCCCCGCAACGTCGCCCGCAAGGCCGAGAACTACCTGACCAGCACCGGCATCGCCGACACCTGCTACTTCGGCGCGGAGG
CGGAGTTCTACATCTTCGACTCGGTGAGCTTCGACTCCCGGATCAACGGCACCTTCTACGAGGTGGACTCCGAGTCGGGC
TGGTGGAACACCGGCGAGCCGTTCGAGGCCGACGGCAGCGCCAACCGCGGCTACAAGGTGCGCCCCAAGGGCGGCTACTT
CCCCGTCGCCCCGTACGACCACTACGTCGACCTGCGCGACGAGATGGCCACCAACCTGCAGAACGCCGGGTTCGTCCTCG
AGCGCGGCCACCACGAGGTGGGCACCGCCGGCCAGGCCGAGATCAACTACAAGTTCAACACCCTGCTGCACGCAGCCGAC
GACGTGTTGCTGTTCAAATACATCATCAAGAACACGGCATGGCAGAACGGCAAGACCGTGACGTTCATGCCCAAGCCGCT
GTTCGGTGACAATGGCTCCGGTATGCACGCCCACCAGTCGCTGTGGAAGGACGGCAAGCCGCTGTTCCACGACGAGTCGG
GCTACGCCGGCCTCTCGGACCTGGCGCGCCACTACATCGGTGGCATCCTGCACCACGCGCCGTCGCTGCTGGCGTTCACC
AACCCGACGGTGAACTCCTACAAGCGGCTGGTGCCGGGCTACGAGGCCCCGATCAACCTGGTCTACAGCCAGCGCAACCG
CAGCGCCTGCGTCCGCATCCCGATCACCGGCAACAACCCGAAGGCCAAGCGGCTCGAGTTCCGCTGCCCGGACAGCTCGG
GCAACCCGTACCTGGCGTTCGCCGCCATGCTGATGGCCGGCATCGACGGCATCAAGCGCAAGATCGAGCCGCTGGCCCCG
GTCGACAAGGACCTCTACGAGCTGCCGCCTGAGGAGGCCGCCAGCATCCCGCAGGCACCGACGTCGCTGTCGTCGGTGAT
CGACAAACTCGAAGAGGACCACGAGTACCTCACCGAGGGCGGCGTGTTCACCAACGACCTGATCGAAACGTGGATCACGT
ACAAGCGCGAGAACGAGATCATGCCCGTGCAGATCCGGCCTCACCCCTACGAGTTCGCGCTGTACTACGACGTGTAA

Protein sequence :
MAEKTADDIIKLIRDENVEYVDIRFCDLPGVVQHFSIPASAFDESVFEDGLAFDGSSVRGFQSIHESDMMLLPDPATARI
DPFRAAKTLNLNFFVHDPFTREAYSRDPRNVARKAENYLTSTGIADTCYFGAEAEFYIFDSVSFDSRINGTFYEVDSESG
WWNTGEPFEADGSANRGYKVRPKGGYFPVAPYDHYVDLRDEMATNLQNAGFVLERGHHEVGTAGQAEINYKFNTLLHAAD
DVLLFKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHAHQSLWKDGKPLFHDESGYAGLSDLARHYIGGILHHAPSLLAFT
NPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIPITGNNPKAKRLEFRCPDSSGNPYLAFAAMLMAGIDGIKRKIEPLAP
VDKDLYELPPEEAASIPQAPTSLSSVIDKLEEDHEYLTEGGVFTNDLIETWITYKRENEIMPVQIRPHPYEFALYYDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 9e-92 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_3226 YP_006453653.1 glutamine synthetase, type I VFG1399 Protein 0.0 86