Gene Information

Name : Mycch_2904 (Mycch_2904)
Accession : YP_006453343.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Virulence
Product : peroxiredoxin
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.5
Position : 3024767 - 3025264 bp
Length : 498 bp
Strand : +
Note : PFAM: Redoxin

DNA sequence : 
ATGGCACAGATAACTTTGCGTGGAAACCCGATCAACACTGTCGGAGAGCTGCCCGCCGTCGGTTCCGCGGCGCCCGGCTT
CACCCTCACGGGCACAGATCTCGGGACGGTCAGCGATGACCAATTCCGCGACAAGCCTCTGCTGCTTAACATCTTCCCGT
CGATCGACACCCCGGTCTGTGCGGCCAGCGTGCGCACCTTCAACGAGCGTGCGGCCGCCGGCGGCGTGTCGGTGCTCTGC
GTCTCGAAGGACCTGCCGTTTGCGCAGAAGCGATTCTGCGGCGCCGAGGGCATCGAGAACGTCACGACGGCGTCGGCGTT
CCGGGACAGCTTCGGCGAGGACTACGGCATCACCATCACCGACGGACCGATGGCGGGGCTGCTGGGCCGCGCGGTCGTCG
TCGTCGGCGCGGACGGCAAAGTCGCCTACACCGAGCTGGTGCCCGAGATCGGCCAGGAGCCCGATTACGACGCGGCGTTG
TCGGCCCTCTCCGCGTGA

Protein sequence : 
MAQITLRGNPINTVGELPAVGSAAPGFTLTGTDLGTVSDDQFRDKPLLLNIFPSIDTPVCAASVRTFNERAAAGGVSVLC
VSKDLPFAQKRFCGAEGIENVTTASAFRDSFGEDYGITITDGPMAGLLGRAVVVVGADGKVAYTELVPEIGQEPDYDAAL
SALSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 4e-28 44
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-28 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 3e-28 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-28 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_2904 YP_006453343.1 peroxiredoxin VFG0087 Protein 1e-28 44