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Name : Mycch_2596 (Mycch_2596) Accession : YP_006453047.1 Strain : Mycobacterium chubuense NBB4 Genome accession: NC_018027 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase (class II) Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 2685747 - 2689055 bp Length : 3309 bp Strand : - Note : PFAM: Uncharacterized conserved protein (DUF2156); tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial DNA sequence : ATGACCTCCACGAGCGGGATGAGGACGCGCCCGGCCTCCAGTTACCGGTGGGTGCCCGCCGCGGCGGGATGGATCGTGGG CGTCATCGCGACGCTGTCGCTGATGGCCAGCATCTCCCCGCTGATCCGGTGGCTGATCAAGGTCCCGCGCGAATTCGTCG ACCACTACATCTTCAACTTTCCCGACACCAGCTTCGCCTGGGCGTTCGTCCTCGCGCTGCTGGCCGCCGCGTTGGCGGCG CGCAAACGCATCGCCTGGTGGATCCTCGTGCTCTACATGGTCGGGTCGATCGGGTGGAACATTGTCGACATCGCGGGCCG CGGCGAGACCTGGATGCGCGAATCCGGCGAGATGATCGGCCTCGCCTTCCACATCGCCTCGGTCGTCTTCCTCGTGCTGG CCCGCAAGGAGTTCTGGGCCCGGGTGCGGCCCGGTGCGCTGCTGAAGGCGGCCGGAGTGCTCGTCGTCGGCATGGGTATC GGCACACTGATCGGCTGGGCGCTGCTGGAGTTCTTCCCCGGAACCCTGGCCCGCCAGGACCGCTTCCTATACGCCCTCAA CCGCGTCAGCGCCTTCGCCGGCGCCGGTGCCGAGTCCTTCAGCGGCCATCCGCACGTCTTCGTCAACGCCCTGCTCGGAC TGTTCGGCGCGGTGGCCCTGATGGTCACGGCAGTGGTGCTCTTCCAATCGCAGCGCGCCGAGAACGCGCTGACCGGTGAG GACGAGTCCGCGATCCGCGGGCTGCTCGAGCTCTGCGGCAAGAACGACTCCCTGGGCTACTTCGCCACACGGCGCGACAA GGCCGTGGTGTTCGCCCCGAATGCCCGCGCCGCCATCACCTACCGCGTCGAGGTCGGGGTGTGTCTGGCCAGCGGCGACC CGATCGGCGACCCCCGAGCCTGGCCCCAGGCCATCGACGCGTGGCTGCAGCTGTGCCAGACCTATGGCTGGGCCCCGGGC GTGATGGGCGCCAGCGCCACCGGCGCACAGGCCTTCCGTGAGGCCGGGCTCAACGCGTTGCAGCTCGGCGACGAGGCGAT CCTGCACCCCGACCGGTTCCGGCTCTCCGGCTCCGACATGCGGGCCGTGCGCCAGGCCGTCACGCGGGCGCGCCGGGCCG GAGTCGCGGTCCGCATGCGCCGGCACCGCGACCTGTCCGCCGACGAGATGGCCGAGGCGGTCGGGCGGGCCGACGCGTGG CGCGACACTCAGGACGAGCGCGGGTTCTCGATGGCGCTGGGCCGCCTCGGCGACCCCGCCGACGGCGACTGCCTCCTGGT CGAAGCGGTCCAGAACGACACCGAGGTGGTCGCGATGCTGTCGCTGGTGCCGTGGGGCTCCAACGGGGTGTCGCTGGACC TGATGCGCCGCTCGCCTCAGTCGCCCAACGGGACGATCGAGCTGATGGTCAGCGAGTTGTGCCTGCAGGCCGAGGTCATC GGGATCACCCGAATCTCGCTGAACTTCGCGATGTTCCGCTCCGCTTTCGAGCAGGGTGCGCAGTTGGGCGCCGGACCGGT GGCCCGGCTGTGGCGCGGGCTGCTGGTGTTCTTCTCGCGGTGGTGGCAGTTGGAGACGCTGTACCGGTCGAACATGAAGT ATCAGCCCGAATGGGTGCCGCGCTACGCGTGTTACGAGGATGCACGGTTGGTGCCGCGCGTCGGCGTTGCGTCGGTCATC GCCGAAGGCTTTCTGGTGCTTCCCTTTTCGCGCCGGCACGAGCAGCCTCACACCGGCCATCACATCGCCGCGCCGGGCGC CCTGGTGGCCACGGGAGTGCTGCACAGCGACGGATCCGCACCCGACCTGGACACCCTGCAGACGGATCTGCCCACCGAGG ACCCCCAGTCCCGGCTGCCCGACCAGGTGCGAGTGCGGATGGCCAAGCTCAAGGCGCTGCAGGCCGAGGGGGTCGACGCC TACCCGGTCGGTAGCCCACCGACCCACACGGTCGCGGACGCGCTCGCGGTCAGCGAGGGTGCCGAAGTGACGGTGGCCGG GCGGGTGCTGCGGCTGCGCGATTACGGCGGCGTGCTGTTCGCCCAGTTGCGTGACTGGTCGGGCGAAGCCCAGCTGTTGC TCGACAACTCGCTGCTGAGCGCCGGCAGCACCGCCGACTTCACGCGCACGATCGACCTCGGCGACCTGATCGAGGTGACG GGGACGATGGGTCGCAGCCGCTCCGGTGCGTGGTCGGTGCTCGTGAGCCGCTGGCGGTTGATCGGTAAGTGCCTGCGACC GTTGCCCGACAAGTGGAAGGGCCTGGCGGACCAGGAGGCACGGGTACGGGCCCGCTACCTCGACCTGGCGATCAACGACG ACGCCCGCGATCTGATCCGGGCACGCAGCGGTGTTCTGCGTGCGATCCGGGAAACGTTGACGGCCAAAGGCTTTCTGGAG GTCGAGACCCCGATCCTGCAACAGGTCCACGGCGGGGCCAACGCACGCCCCTTCCTGACCCACATCAACGCCTACGACCT GGACCTCTATCTGCGGATCGCCCCGGAGCTGTACCTGAAACGGTTGTGCGTCGGCGGTGTCGAGCGCGTCTTCGAACTCG GCCGCGCCTTCCGTAACGAGGGTGTGGACTTCAGCCACAATCCCGAATTCACGCTGCTCGAGGCCTATCAGGCGCACGCC GACTACACCGTGTGGATCGACGGATGTCGTGAGCTGATCCAGAACGCCGCCCGGGCCGCCAACGGCGCAGAGGTGTTCCT CCGGCCGACCGAGGACGGCGCACTGCAGCCCGTGGACATCTCCGGCCAGTGGAGGGTCCAGACCGTGCACGACGCCGTGT CGGAGGCGCTGGGTGAACACATCGACAGCACCACCGATCTGAGCGCGCTGCGCCGGCTCTGCGACAGGGCGGACATCCCC TACCGGACGCACTGGGACGAGGGCGCGGTGGTACTGGAGATGTATGAGCACTTGGTCGAGGACGGCACGGAACAGCCGAC GTTCTACACGAACTTCCCGACGTCGGTGTCGCCTCTGACCCGGCCGCACCGCAGCATCCCGGGAGTCGCCGAGCGCTGGG ACCTGGTCGCGTTCGGCGTCGAGCTTGCAACGGCCTACAGCGAACTCACCGACCCCGTGGAACAGCGCAGGCGCCTGCAG GAGCAGTCCCTGCTGGCGGCCGGCGGCGATCCGGAAGCCATGGAACTCGACGAGGATTTCCTGCAGGCGATGGAGTACGC GATGCCGCCCACCGGTGGTCTGGGCATGGGTGTCGATCGCGTCGTCATGCTGATCACCGGGCGCAGCATTCGGGAGACGC TGCCTTTCCCGTTGGCCAGACCGCGATAG Protein sequence : MTSTSGMRTRPASSYRWVPAAAGWIVGVIATLSLMASISPLIRWLIKVPREFVDHYIFNFPDTSFAWAFVLALLAAALAA RKRIAWWILVLYMVGSIGWNIVDIAGRGETWMRESGEMIGLAFHIASVVFLVLARKEFWARVRPGALLKAAGVLVVGMGI GTLIGWALLEFFPGTLARQDRFLYALNRVSAFAGAGAESFSGHPHVFVNALLGLFGAVALMVTAVVLFQSQRAENALTGE DESAIRGLLELCGKNDSLGYFATRRDKAVVFAPNARAAITYRVEVGVCLASGDPIGDPRAWPQAIDAWLQLCQTYGWAPG VMGASATGAQAFREAGLNALQLGDEAILHPDRFRLSGSDMRAVRQAVTRARRAGVAVRMRRHRDLSADEMAEAVGRADAW RDTQDERGFSMALGRLGDPADGDCLLVEAVQNDTEVVAMLSLVPWGSNGVSLDLMRRSPQSPNGTIELMVSELCLQAEVI GITRISLNFAMFRSAFEQGAQLGAGPVARLWRGLLVFFSRWWQLETLYRSNMKYQPEWVPRYACYEDARLVPRVGVASVI AEGFLVLPFSRRHEQPHTGHHIAAPGALVATGVLHSDGSAPDLDTLQTDLPTEDPQSRLPDQVRVRMAKLKALQAEGVDA YPVGSPPTHTVADALAVSEGAEVTVAGRVLRLRDYGGVLFAQLRDWSGEAQLLLDNSLLSAGSTADFTRTIDLGDLIEVT GTMGRSRSGAWSVLVSRWRLIGKCLRPLPDKWKGLADQEARVRARYLDLAINDDARDLIRARSGVLRAIRETLTAKGFLE VETPILQQVHGGANARPFLTHINAYDLDLYLRIAPELYLKRLCVGGVERVFELGRAFRNEGVDFSHNPEFTLLEAYQAHA DYTVWIDGCRELIQNAARAANGAEVFLRPTEDGALQPVDISGQWRVQTVHDAVSEALGEHIDSTTDLSALRRLCDRADIP YRTHWDEGAVVLEMYEHLVEDGTEQPTFYTNFPTSVSPLTRPHRSIPGVAERWDLVAFGVELATAYSELTDPVEQRRRLQ EQSLLAAGGDPEAMELDEDFLQAMEYAMPPTGGLGMGVDRVVMLITGRSIRETLPFPLARPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS1 | YP_005682181.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 1e-160 | 42 |
| lysS1 | YP_005684273.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-161 | 42 |
| lysX | YP_003784331.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-161 | 42 |
| lysS1 | YP_005686365.1 | lysyl-tRNA synthetase | Not tested | PiCp 7 | Protein | 5e-161 | 42 |
