Gene Information

Name : Mycch_2246 (Mycch_2246)
Accession : YP_006452702.1
Strain : Mycobacterium chubuense NBB4
Genome accession: NC_018027
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2297194 - 2299317 bp
Length : 2124 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-transloc

DNA sequence :
ATGACACCCCGCCACGATCGCGACGGCCATGTCGCGACCAGCCGTCGCGCCGAAGACCACGAGGCCCACGAGGCCCACGA
AAGCCATGCCGGCCACGCCGATCACGTCGCGCAATTCCGAAAGCTGTTCTGGGTCAACCTGATCATCGCCGTGCCCGTCG
TGGCGTTCTCGACCATGTTCGCCATGCTGGTCGGCTATCAGGTTCCCGACGTGCCAGGCGGCCGCTGGATCGCGCCGCTG
CTCGGCACGGTCATGTATGCCGTCGGGGGCCGCCCCTTCCTCACCGGTGCCGTCAGTGAAATCCGTTCCCGCAAGCCAGG
AATGATGCTGTTGATCGGCCTGGCGATCACCGTCGCGTTCCTGGCTTCGTGGGGCGCGAGCCTGGGCCTGCTCGATCACG
AGTTGGAATTCTGGTGGGAGCTGGCGCTGCTGATCGTCATCATGCTGCTCGGTCACTGGGTCGAGATGCGTTCCCTGGCT
CAGACCACCTCCGCGCTCGATTCCCTGGCCGCACTGCTCCCCGACGAAGCAGAAAAGGTCGAGGCCGATCACACGGTTAC
TGTTTCGCCCGCGGATCTGCGGGTCGGCGACGTGGTGGTGATCCGGCCCGGCGGCAGTGTGCCCGCCGACGGCAGGATCG
TCGAGGGCCGCGCAGACATCGACGAGTCGATGGTGACCGGCGAGTCCAGGTCGATCGCCCGGGGCGTCGGCGACGCCGTC
ACGGCGGGCACCGTCGCCACCGACTCCGGGTTGCGGGTCGAGGTCACCGCCACCGGCGACGACACCACGCTGGCCGGGAT
CCAACGCTTGGTGACCGAGGCGCAGAACTCCACGTCGCGCGCCCAGCGCCTCGCGGACCGCGCGGCCGGCTGGCTGTTCT
GGTTCGCCCTGAGCACGGCGGCCATCACCGCCACGATCTGGACGACGTTCGGCAGCCCCGCCGCGGCCGTCGTGCGCGCC
ATCACGGTGCTCGTCATCGCATGCCCGCACGCGCTGGGCCTGGCGATTCCGCTGGTCGTCTCCATCGCCACCGAACGGGC
CGCCCGAGGCGGGGTGCTCATCAAGGACCGGCTGGCTTTGGAGAGCATGCGGACCGTCGATGCGGTGCTGTTCGACAAGA
CCGGGACCCTGACCAAGGGTGAACCCACCGTCACCGCGATCGAGTCCGTCGGCGAGGTCGGGGACGACGCCGTGCTCGCG
CTGGCAGCCGCGGCCGAGACCGACAGCGAGCATCCGCTGGCCCATGCCATCGTGCGCGCCGCCCGGGACCGCGGGCTCTC
CGTGCCGCGCGCCGGCGGATTCTCCTCGTCGCCGGCCGTCGGCGTGACCGCGTCGGTCGACGGGCGCGAGATCCGGGTGG
GCGGTCCCCGCCTGCTCGAACAGATCGGCGCCGACGAGGTCGGCACTGCGGCCGGCTGGCGCGAGGAAGGCGCGATCATC
CTGCACGTCGTCCGGGACGGCGCCGTCATCGGCGGCCTACGGCTGGCCGACGAGATCCGCCCCGAATCCCGCGAGGCCGT
CGATGCGCTGCACAGGCTGGGCATCGAGGTTGTGATGATCACCGGCGACGCCGAAGCCGTGGCGCGGGCTGTCGGCGACG
ACCTGGGCATCGACCGAGTGTTCGCCGGCGTGCGCCCGGAAGACAAAGCGGCGAAAGTGTCTGGGCTGCAACGCGAAGGC
AAGAAGGTCGCCATGGTCGGTGACGGCGTCAACGACGCACCGGCGCTGGCGCAATCCGACGTCGGCATAGCGATCGGCGC
GGGGACCGACGTCGCGATCGCGTCGGCCGGCGTCATCCTGGCCAGTTCTGATCCGCGCTCCGTGCTGTCGGTGATCGAGC
TGTCGCGCGCCACCTATCGCAAGATGAAGCAGAACCTGTGGTGGGGTGCCGGCTACAACCTGATCTCGGTGCCGCTGGCC
GCCGGGGTGCTGGCACCCGTCGGATTCGTGTTGCCGATGTCGGTCGGCGCGATCCTGATGTCCCTGTCGACGGTGGTCGT
TGCGCTCAACGCGCAGCTTCTGCGCCGCATCGATTTGCGGCCGGAGGCCAGCAGCCGCGCCGCCCTGGACCGTTCGAGCG
GTGTCGACCGGCGCGCGGACAACAGGAGTGGCGTGCGGCAGTAG

Protein sequence :
MTPRHDRDGHVATSRRAEDHEAHEAHESHAGHADHVAQFRKLFWVNLIIAVPVVAFSTMFAMLVGYQVPDVPGGRWIAPL
LGTVMYAVGGRPFLTGAVSEIRSRKPGMMLLIGLAITVAFLASWGASLGLLDHELEFWWELALLIVIMLLGHWVEMRSLA
QTTSALDSLAALLPDEAEKVEADHTVTVSPADLRVGDVVVIRPGGSVPADGRIVEGRADIDESMVTGESRSIARGVGDAV
TAGTVATDSGLRVEVTATGDDTTLAGIQRLVTEAQNSTSRAQRLADRAAGWLFWFALSTAAITATIWTTFGSPAAAVVRA
ITVLVIACPHALGLAIPLVVSIATERAARGGVLIKDRLALESMRTVDAVLFDKTGTLTKGEPTVTAIESVGEVGDDAVLA
LAAAAETDSEHPLAHAIVRAARDRGLSVPRAGGFSSSPAVGVTASVDGREIRVGGPRLLEQIGADEVGTAAGWREEGAII
LHVVRDGAVIGGLRLADEIRPESREAVDALHRLGIEVVMITGDAEAVARAVGDDLGIDRVFAGVRPEDKAAKVSGLQREG
KKVAMVGDGVNDAPALAQSDVGIAIGAGTDVAIASAGVILASSDPRSVLSVIELSRATYRKMKQNLWWGAGYNLISVPLA
AGVLAPVGFVLPMSVGAILMSLSTVVVALNAQLLRRIDLRPEASSRAALDRSSGVDRRADNRSGVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 1e-87 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_2246 YP_006452702.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0629 Protein 6e-121 47
Mycch_2246 YP_006452702.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0383 Protein 4e-103 42
Mycch_2246 YP_006452702.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0079 Protein 6e-119 42
Mycch_2246 YP_006452702.1 copper/silver-translocating P-type ATPase,heavy metal-translocating P-type ATPase, Cd/Co/Hg/Pb/Zn-transporting BAC0101 Protein 3e-78 42