|
Name : Mycch_1202 (Mycch_1202) Accession : YP_006451689.1 Strain : Mycobacterium chubuense NBB4 Genome accession: NC_018027 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : - COG ID : - EC number : 2.4.2.4 Position : 1220299 - 1221636 bp Length : 1338 bp Strand : + Note : PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase DNA sequence : GTGACGCAGGCCACATTCGGCGCACCTGAGCCCATGTCGCATCTCGATGCTCCGTCCGTCATCCGGACCAAGCGCGACGG CGGCGTGCTGTCCGACGACGTGATCGACTGGGTGATCGACGGCTACACCCATGACCGGATCGGCGACGGTCAGATGGCCG CGCTGCTGATGGCGATCTTCCTGCGCGGGATGACCCGTGCCGAGATCGCCCGCTGGACGGCGGCCATGGTGGCCTCGGGC GAGCGGTTCGATTTCAGCGACCTGCGCCGGGCCGGGCGTCCGCTTGCGTTGGTGGACAAGCACTCCACGGGCGGGGTGGG CGACAAGATCACCATCCCGCTGGTGCCGGTGGTGATGGCGTGCGGAGGCGCCGTCCCGCAGGCCGCGGGGCGCGGGCTCG GCCATACCGGCGGCACCCTCGACAAACTCGAGTCCATCCCCGGCTTCACCGCCGAACTGACCAAACAGCAGATCCGTCAA CAACTTTGCGATATCGGCGCGGCGATCTTCGCCGCCGGCGAGCTCGCCCCGGCCGACCGCAAGATCTACGCACTGCGCGA CGTCACCGGCACCACCGAGTCGCTGCCGCTGATCGCGAGTTCGGTGATGAGCAAGAAGATCGCCGAGGGCACCCGCGCGC TGGTGCTCGACACCAAGGTCGGCTCGGGCGCCTTCCTGGCCACCGAGGCCGAGGCCAGGGAGCTGGCCCGCACGATGGTC GACCTGGGCGCCGAACACGGCCTGCCGACCCGCGCGGTGCTCACCGACATGGAGGTGCCGCTGGGCCGCACGGTCGGCAA CGCCGTCGAGGTCGTCGAGTCGCTCGAGGTGCTCGAAGGCGGCGGCCCCGCCGACGTGGTGGAGCTGACGCTGGCGCTGG CGGGGGAGATGCTCGACCTCGCGGGCCTCGACGGGGTGGACCCGGCGGAGACGCTGGGTGACGGCACCGCCATGGACGCG TTCCGCGCGCTGGTCGGCGCGCAGGGCGGCGACGTCGCGGCGCTGTCGGCCGAGGCGCTGCCGCTCGGATCGCACACCGA GACCGTCAGGGCGTCGGGAAGTGGCACGATGGGCGACATCGACGCGATGGCCGTGGGATTGGCGGTGTGGCGACTCGGGG CGGGCCGCTCCGAGCCGGGACAGCGCGTGCAGTCGGGCGCGGGCCTGCGCATCCACCGCCGTCCCGGCGAGCCCGTCGCG CCCGGTGAGCCGTTGTTCACCCTCTACACCGACACCCCGGAGCGGCTCGGCGCGGCACTGTCCGAGCTCGACGGGGCGTA CCGCATCGCGACCGAGCCGCCGGCCCAGCGGCCGCTGATCATCGACCGGATCACGTGA Protein sequence : MTQATFGAPEPMSHLDAPSVIRTKRDGGVLSDDVIDWVIDGYTHDRIGDGQMAALLMAIFLRGMTRAEIARWTAAMVASG ERFDFSDLRRAGRPLALVDKHSTGGVGDKITIPLVPVVMACGGAVPQAAGRGLGHTGGTLDKLESIPGFTAELTKQQIRQ QLCDIGAAIFAAGELAPADRKIYALRDVTGTTESLPLIASSVMSKKIAEGTRALVLDTKVGSGAFLATEAEARELARTMV DLGAEHGLPTRAVLTDMEVPLGRTVGNAVEVVESLEVLEGGGPADVVELTLALAGEMLDLAGLDGVDPAETLGDGTAMDA FRALVGAQGGDVAALSAEALPLGSHTETVRASGSGTMGDIDAMAVGLAVWRLGAGRSEPGQRVQSGAGLRIHRRPGEPVA PGEPLFTLYTDTPERLGAALSELDGAYRIATEPPAQRPLIIDRIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-91 | 53 |
