Gene Information

Name : Desti_5636 (Desti_5636)
Accession : YP_006450480.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6495127 - 6495831 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAAATCTCTCCTGAACCTCGTACATGTAAGCAAACGTTTTCATAACGGCGAGGGTAGCGAAGTCTTCCCTTTGAGGGA
TGTGAACCTCCGAATAGAACACGGGGAACGCATCATCCTCCTGGGAAAAAGCGGATCGGGAAAGACCACGTTTCTCAATC
TTGTCGGAGGAATGGATTCTCCAACAGAGGGCAGGATCTTTTTCAACGGCAACGAGATCACAGGTCTTTCTACCGTAAAG
CTTGCAGAGTATCGCAGGAGAGATGTCGGTTTCATTTTTCAATCGTTTAATCTGTTCCCGACTTTGACGGTGGGAGAAAA
CCTGATGCTGCCTTTGGATCTCCTGGGCGTATCTCAGGAATCCAAAGCCAGAGAAATACTCTCTGCGGTAGGGCTTGACG
GACAATGGGATAAGTTCCCGGAACAACTATCCGGAGGCGAACAACAACGTGTAGCCATTGCGCGTGCTCTCATCAAAGAA
CCCCGATTGATTCTTGCTGACGAACCCACGGGTAATCTGGATTCTGAAACCGGAGACCGCATACTCTCCCTCATATACGA
GATCTGCCGCGATCGTCAAACTACCCTTATCATGGTGACCCACAGCTCCGAAGCTCTCTGGATGGCGGACAGAAAATTTC
GTCTGAGCAGAGGCAGGCTTCTCCAGGAAGACAACACTGCTCCTAAAGAACTCGATCGAACCTGA

Protein sequence :
MKSLLNLVHVSKRFHNGEGSEVFPLRDVNLRIEHGERIILLGKSGSGKTTFLNLVGGMDSPTEGRIFFNGNEITGLSTVK
LAEYRRRDVGFIFQSFNLFPTLTVGENLMLPLDLLGVSQESKAREILSAVGLDGQWDKFPEQLSGGEQQRVAIARALIKE
PRLILADEPTGNLDSETGDRILSLIYEICRDRQTTLIMVTHSSEALWMADRKFRLSRGRLLQEDNTAPKELDRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-35 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_5636 YP_006450480.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-41 44
Desti_5636 YP_006450480.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 4e-31 43
Desti_5636 YP_006450480.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 2e-40 43
Desti_5636 YP_006450480.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 5e-38 42
Desti_5636 YP_006450480.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 2e-36 42