Gene Information

Name : Desti_4973 (Desti_4973)
Accession : YP_006449850.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5739509 - 5741566 bp
Length : 2058 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGCATAAAAACCACGAAAACAGTTCAGCAAAGCAAACGGATACAGCTTCTGAACAGGAGCATCACGAACAGGAACACGC
CGGTCCGGCTCATCATGTCGATCATACCGGTCATGAGGTCTTGTTCCGCCGCAAATTTTGGGTATGCCTTGTCTTGAGCG
CACCAGTGCTGCTTTTCAGCCCGATGCTGCAGAGTTGGTTGGGATTCGGTATGCCTCAAATTCCGGGAAGCAACCTTATA
TCGCCATTCTTTTCCGTGATCGTCTTCCTGTATGGCGGTCTGCCTTTTCTACAAATGGCAAAACCGGAAATCCTGGATAG
CAAACCCGGGATGATGACTCTGATCTCGCTGGCCATAACGGTTGCCTTCCTGTACAGTCTGGCGGCATTGTTTTTGAAAT
CGGAAACCTTCTTCTGGGAACTCGTCACTCTGATCGACGTCATGCTTCTCGGGCACTGGATTGAAATGCGCAGTATTCGC
CAGGCCTCGGGAGCGCTCGATGAATTGGCAAAATTGCGACCCGACACAGCGGAACGGCTTTCTGAAGATGGTGAAGTGGA
AGAGATTCCTATCGATCGGTTGAAAGAAGGCGATCGCGTTTTAGTGCGCCCGGGAGCGACCATTCCTGCAGACGGCATTA
TTGAGGAAGGTGAATCGGACGTCAATGAATCCATGGTAACCGGCGAATCAAAATACGTCCGAAAGACTCCCGGATCGAAA
GTCATTGGAGGAACCATAAACCAGGATGGAAGCCTTCGAGTAAAAGTTACCGCCATAGGGGAAGGAACTGCACTGGCGGG
CATCATGCGGTTGGTAAAACAAGCGCAGCAGAGCAAGTCCAAAACGCAATTACTTGCCGACAGAGCTGCGGGGTGGCTGT
TCTATATTGCTCTGGGAACTGCGATACTCACCGGTATTGCATGGACCATAGTAGTTGGTTTCCGCGTCGAAACTATCTCA
CGAGTAGCCACAGTCCTTGTAATTGCATGCCCGCACGCTCTGGGACTTGCTATTCCGCTCGTCATAGCCATAACCACGGG
ATTGGGGGCTCAAAAAGGGATACTTGTGCGGGATAGAGTTGCCCTGGAAAAGGCGAAATCCGTAAACACCATCATATTCG
ACAAGACAGGAACATTGACAAAAGGCGAATTCGGGGTTGTCGGGGTGGCAACCGTGAACGACTGGACCGAAGAAAGAGCG
CTCATGTTTGCTGCATCTGCGGAATCGGATTCGGAACACACGGTAGCACGAGGGATTCTTCAGGCTGCGAAAGATAGGGG
TCTCGATCCTCCCCGGGCCTCTGATTTTTCGGCAATAAAAGGCCGGGGCGTCAAAGTAACTGTAGAGAATCAGACGATCC
ATTTGGGCGGACCGCGTCTGATGGAAATGCTCCATGCCGAATTGCCCCCTGAACTCGAGGAATTCACAAACACGGGGGAT
GAGAAAGGGTGGACGATTATATACCTTCTCCAAGATGAAAAGCCTGTTGCTGCTTTCGGTCTTGCAGATGTGATCCGCTC
GGAAAGCCGGGAAGCTGTTCAGCGAATCCACGAAATGGGGATCAAGGTTTCCATGGTCACGGGAGACAGCCATGCGGTTG
CCCAATCAGTGGCAAGGGAGTTGGGCATTGATGAATTCTTCGCAGAAATTCTTCCCGAGCACAAAGACAAAAAAGTTGTA
GAGCTACAAGAGCGTGGCGATCTCGTTGCCATGGTTGGAGACGGGATCAATGACGCTCCGGCATTGAGTCGTGCGGATAT
TGGAATAGCAATCGGAAGTGGCACGGAAGTAGCTGTGGAGTCTGCAGGCATCATTCTCGTGAACGATAACCCTCTGGATG
TCTCCCGCGTCATCGCGCTGAGCAGGTCAAGCTACAGAAAGATGGTCCAAAACCTTGCCTGGGCTTCGGGGTACAATGTT
GTGGCTCTGCCCCTGGCTGCCGGAGTTCTCGCTCCCTGGGGTATTGTCCCCTCCCCTGCCATAGGAGCGGTATTCATGTC
TCTCAGCACGGTGATTGTGGCAATCAATGCCCAACTCCTGAGACGGCAGGAATTGTAG

Protein sequence :
MHKNHENSSAKQTDTASEQEHHEQEHAGPAHHVDHTGHEVLFRRKFWVCLVLSAPVLLFSPMLQSWLGFGMPQIPGSNLI
SPFFSVIVFLYGGLPFLQMAKPEILDSKPGMMTLISLAITVAFLYSLAALFLKSETFFWELVTLIDVMLLGHWIEMRSIR
QASGALDELAKLRPDTAERLSEDGEVEEIPIDRLKEGDRVLVRPGATIPADGIIEEGESDVNESMVTGESKYVRKTPGSK
VIGGTINQDGSLRVKVTAIGEGTALAGIMRLVKQAQQSKSKTQLLADRAAGWLFYIALGTAILTGIAWTIVVGFRVETIS
RVATVLVIACPHALGLAIPLVIAITTGLGAQKGILVRDRVALEKAKSVNTIIFDKTGTLTKGEFGVVGVATVNDWTEERA
LMFAASAESDSEHTVARGILQAAKDRGLDPPRASDFSAIKGRGVKVTVENQTIHLGGPRLMEMLHAELPPELEEFTNTGD
EKGWTIIYLLQDEKPVAAFGLADVIRSESREAVQRIHEMGIKVSMVTGDSHAVAQSVARELGIDEFFAEILPEHKDKKVV
ELQERGDLVAMVGDGINDAPALSRADIGIAIGSGTEVAVESAGIILVNDNPLDVSRVIALSRSSYRKMVQNLAWASGYNV
VALPLAAGVLAPWGIVPSPAIGAVFMSLSTVIVAINAQLLRRQEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 3e-90 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_4973 YP_006449850.1 copper/silver-translocating P-type ATPase BAC0629 Protein 3e-136 50
Desti_4973 YP_006449850.1 copper/silver-translocating P-type ATPase BAC0079 Protein 4e-132 44
Desti_4973 YP_006449850.1 copper/silver-translocating P-type ATPase BAC0383 Protein 2e-106 42
Desti_4973 YP_006449850.1 copper/silver-translocating P-type ATPase BAC0101 Protein 1e-93 41