Gene Information

Name : Desti_4682 (Desti_4682)
Accession : YP_006449567.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5406063 - 5406821 bp
Length : 759 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGCAGAATCACGTAATTATCGAAACCGTGGACCTGGTGAAAGACTATGTAGATGGTACAAATCTGATCCATGCGCTCAG
GGGTGCCAATATCAAGGTATATCAGGGTGAAATGGTCGCCATAATGGGACCTTCAGGATCGGGAAAATCTACTTTGCTTT
ATGTGCTGGGATTATTACAGCCTCCGACATCCGGCACGTACCTGTTCAAAGGACAGAATATCCTTGAGTATTCCCGTGAA
GAGCAGGCAGAGTTCAGGAACAAGGAATTGGGTTTTGTTTTCCAGAGCTGTGATCTGCTTCCCAATTCCACAGTCTTCGA
GAATCTGGAATTACCACTCATCTATGCCGAATCAGACCGCCGGGCGCGAAGAAGAAGAATTCTCGAGGCACTTGATAGAG
TAGGTCTTTCACATCGGGTGGATCATTGGTCCAATAAGCTGTCCGGAGGAGAGCGACAAAGGGCTGCTATCGCCAGAGCA
CTCGTGAATAGCCCTTCCTTGATCCTTGGTGACGAACCCACAGGCCAGCTCGACCAGAAGAACACGGAAATTGTGGTGAA
CCAATTGAGAGCAATAGCCGGCCAGGGATTTACCGTTGTGCTCGTCACTCATGAAGAGGATATCGGCCAAGCTTGCGATC
GTATCATCAGGATACGCGATGGATCTGTCGTCTCCGAAGGATTCGAGACAGGATACGTTCCGGCAATTCTGAGGGGTGTG
TTACCGGATACACACGCATTTGCCAACCAACAACTCTGA

Protein sequence : 
MQNHVIIETVDLVKDYVDGTNLIHALRGANIKVYQGEMVAIMGPSGSGKSTLLYVLGLLQPPTSGTYLFKGQNILEYSRE
EQAEFRNKELGFVFQSCDLLPNSTVFENLELPLIYAESDRRARRRRILEALDRVGLSHRVDHWSNKLSGGERQRAAIARA
LVNSPSLILGDEPTGQLDQKNTEIVVNQLRAIAGQGFTVVLVTHEEDIGQACDRIIRIRDGSVVSEGFETGYVPAILRGV
LPDTHAFANQQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_4682 YP_006449567.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 7e-40 45
Desti_4682 YP_006449567.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 2e-31 44
Desti_4682 YP_006449567.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 3e-38 42
Desti_4682 YP_006449567.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 9e-32 41