Gene Information

Name : Desti_4637 (Desti_4637)
Accession : YP_006449525.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5362988 - 5363899 bp
Length : 912 bp
Strand : -
Note : PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD

DNA sequence : 
ATGAGATTTAAAGACACATCCGTGCTTCATACCATAATAGCAGGTTTTTTGGATCATTTAATCGTTGACGTGGGGCTTGC
ACAGTTGACCGTTGAATCCTATAGCTCCGATCTGAAAGGATTTGCGGACTTTCTCACCAGAAAGAATGTAGCCGATCCCA
AGGATATCGGTCGCGAGAATATCCTCACCTTTTTGGCTATGATGGCTGCACGAGGCTACAGTCCGCGTACGCGCGCCAGA
AAAATCTCCTGCGTCAAATCCTTTTTCAAGTATTGTGCGGAAAGAGGCTTGCTCAAAGAAGATCCTACCCTTCATCTGGA
TACCCCGCGACTGCCAAAGAGGATTCCCGAGTATCTCGAAATACATGAAGTGGATGCCCTGCTTGCAGTGGTAGACACCG
GCACCCCTGAAACATCCCGCGATCGAGCCATGTTCGAACTTCTCTACGCATGTGGTCTTCGCGTCTCGGAATTGGTTTTG
CTGGAACTACATCGTATCGATCTGGAAATCGGCTGCGTTACTGTTATGGGAAAAGGTTCCAGAGAGCGAATCGTTCCCAT
GGGAATTCCTGCCCTGAAGGCGCTCGTCAATTACCTGGATCACGTCAGACCGCGTCTGCTGGGGCCCAGGCGACACAACG
CTCTGTTTGTTACTCGACGAGGAAAGCCCATGACCCGACAGAGTTTTTGGAAAATAGTAAAGAAGAATGCTCTAAAGGCA
GGGATAACAAAAGAAATCTCTCCCCATACCCTTCGACATTCGTTCGCAACGCACCTGGTCCAAAACAATGCAGACCTCAG
GTGGGTTCAGGTCATGCTCGGTCATGCTGACATTTCTACCACCGAGATCTATACCCATGTCGCACGGCACAGACTAAAGC
AATTGCACACCGACTGTCATCCTCGGGGTTAA

Protein sequence : 
MRFKDTSVLHTIIAGFLDHLIVDVGLAQLTVESYSSDLKGFADFLTRKNVADPKDIGRENILTFLAMMAARGYSPRTRAR
KISCVKSFFKYCAERGLLKEDPTLHLDTPRLPKRIPEYLEIHEVDALLAVVDTGTPETSRDRAMFELLYACGLRVSELVL
LELHRIDLEIGCVTVMGKGSRERIVPMGIPALKALVNYLDHVRPRLLGPRRHNALFVTRRGKPMTRQSFWKIVKKNALKA
GITKEISPHTLRHSFATHLVQNNADLRWVQVMLGHADISTTEIYTHVARHRLKQLHTDCHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-47 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-47 42