Gene Information

Name : Desti_0460 (Desti_0460)
Accession : YP_006445459.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 544760 - 545458 bp
Length : 699 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGATAGAAGTGAGGGGCCTTTACAAGACGTTTAACAAAGATAGGGCTGATGTCCATGTGCTGAAGGATGTTTCCTTGAC
GATCGACAAGGGAGAATTCGTTTCGATTATGGCTCCATCGGGCATGGGCAAGAGCACTCTGCTCAACGTTTTGGGATGCC
TGGACCAACCGACTTCAGGCTCGTATCAACTTGATGGCGTTCCAATCCACGATATGAACGACGACGAACTCTCTGCAATA
CGCAACAAGAAAATCGGTTTTGTCTTCCAGTCGTTTCACTTGCTCCCAAGAATGACAGCCTGGGAAAACGTGATTCTGCC
GCTCCTTTACGGCGATGACGATTCAAACATGAAAGAAAAGGCTGTTGAAGTGTTGACTTCTGTGGGGCTCGCCGACCGTG
TCGATCACCTGCCCAAAGAATTGTCCGGTGGTCAGCAACAACGGGTAGCTGTCGCCAGAGCCTTAATAAACGACCCTAGC
ATCATTCTGGCGGATGAACCCACCGGAAATCTGGACTCAAGTTCCGGAGAAGAAGTGATGAATATATTCAGAAAGCTGCA
CTCTGAAGGGGTGACTCTGGTCGTCGTGACCCACGACATGGACGTGGCTCTGCAGGCAGACCGGCTGATTCAGATGAAAG
ACGGCAAGATCTCCGGGGATAGCGTGGCAAAGGGTGCAGCGCCGGAGGTCTTGAGATGA

Protein sequence :
MIEVRGLYKTFNKDRADVHVLKDVSLTIDKGEFVSIMAPSGMGKSTLLNVLGCLDQPTSGSYQLDGVPIHDMNDDELSAI
RNKKIGFVFQSFHLLPRMTAWENVILPLLYGDDDSNMKEKAVEVLTSVGLADRVDHLPKELSGGQQQRVAVARALINDPS
IILADEPTGNLDSSSGEEVMNIFRKLHSEGVTLVVVTHDMDVALQADRLIQMKDGKISGDSVAKGAAPEVLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-36 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 9e-38 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-38 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 5e-54 49
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 1e-45 49
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 2e-43 48
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 2e-42 45
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686946. Protein 1e-27 41
Desti_0460 YP_006445459.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 5e-35 41