Gene Information

Name : Desti_4477 (Desti_4477)
Accession : YP_006449373.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5190153 - 5190848 bp
Length : 696 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence :
ATGAGTTATATAGTAGCGAATCAGGTGGCAAGAGAATTCGGCCAAGGTGAAAACAAGGTAACTGCGGTCCGAAGAATCGA
TCTATCCATAGGTCAGTCTGAATTTATCTCGATCATGGGTGAATCCGGTGCAGGAAAAAGCACGTTGCTCTCCATGCTCG
GAGGGCTCTTGAGCCCCACCAAAGGCGAGATCCTCGTGGGAGACATCAATATATACGCTCTCAAACGTGACAAACTGGCC
GATTTCAGGCGTGAGTTCATGGGCTTCATCTTCCAGTCCTTTCAACTGGTGCCGTACCTGAACGTTATAGAAAACGTGCA
GCTTCCCCTTGCTGTAACACACCATTCAGAAGCGGATAAGAAGAAACTCGCGCTGTCTGCGCTGGAACGTGTGGGCCTGA
AAGATAAGGCTTTGCGGCTGCCCAATCAGCTTTCCGGAGGCGAACAGGAGAGAGTGGCAATAGCGCGGGCTGTGGTTAAC
GAACCACCCATTCTGTTCGCGGACGAACCTACCGGGAACCTGGATTCCAGAAATTCCGAAGAAGTCATGAACTTGCTCAA
GCGCTTGAACTCCGAAGGCCAGACAATCGTTATGGTTACGCACAGCAGACGAAATGCGGAATACGCAGACCGGATCGTCG
AAGTTGCAGACGGCTGCATTAGCGTTTCCAAACCGATCAGGGCTGCAGCTTGTTAG

Protein sequence :
MSYIVANQVAREFGQGENKVTAVRRIDLSIGQSEFISIMGESGAGKSTLLSMLGGLLSPTKGEILVGDINIYALKRDKLA
DFRREFMGFIFQSFQLVPYLNVIENVQLPLAVTHHSEADKKKLALSALERVGLKDKALRLPNQLSGGEQERVAIARAVVN
EPPILFADEPTGNLDSRNSEEVMNLLKRLNSEGQTIVMVTHSRRNAEYADRIVEVADGCISVSKPIRAAAC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_4477 YP_006449373.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 3e-38 46
Desti_4477 YP_006449373.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene598.p Protein 8e-34 45
Desti_4477 YP_006449373.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-38 44
Desti_4477 YP_006449373.1 ABC-type antimicrobial peptide transport system, ATPase component NC_008702.1.4606598. Protein 7e-31 42