Gene Information

Name : Desti_4314 (Desti_4314)
Accession : YP_006449212.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Virulence
Product : ATPase component of Mn/Zn ABC-type transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5014908 - 5015675 bp
Length : 768 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
ATGGCCACTAATCACGACATCCCGGCAATCGAGGTCAAGAATCTCACCGTAAGCTTCGGTCCCAGACCGGCTCTTCTCGA
TATATCCGTGCGTATCGAGCAGGGCGTCTCAGTAGGCATCATTGGACCCAACGGTGCGGGAAAATCGACGTTCATAAAAG
CAGTACTCGGATTTGTCAAACCGGATTTCGGTACGGTTAAGATCCTGGGATTTCCCGCAACCCAGGCGAAGGGACTGGTG
GCCTATGTCCCGCAACGGGGAGCCGTTGATTGGGACTATCCGATCACTGTTGCGGAAGTGGCAATGATGGGCCGATACGG
GCACATCCCCTGGTGGAAAGATCCGAGTCGATCCGACTGGCAAATAGTACAGGAAGCCCTGGAAATGGTCCGTATGGAGG
AATTTCGCGATCGCCAGATCGGCCAGTTGTCAGGGGGGCAACAGCAGAGGGTCTTCATGGCGCGAGCCCTCACTCAGGGA
GCTGATATACTCCTGCTCGACGAACCCTTTGCCGGCGTCGATGCTGCTACTGAAAGAGCTATTCTCGATGTTCTCGATCG
CGCCAAGAAGTCAGGCAGGACTTTGCTCGTGGTGCATCACGATTTGACTACCGCCGGGGAATACTTTGATCTGCTCATGC
TGATAAAACAGAGACTATATGCATACGGCAGCCCTGAGACCGTACTCAACCCGGGCCTCCTCAGCGAAGTGTACGAAGGG
AAGCTCAGGGTTTTTTCCGGCCTGAAAGCGCAAGAGGAATCCGGCTAA

Protein sequence : 
MATNHDIPAIEVKNLTVSFGPRPALLDISVRIEQGVSVGIIGPNGAGKSTFIKAVLGFVKPDFGTVKILGFPATQAKGLV
AYVPQRGAVDWDYPITVAEVAMMGRYGHIPWWKDPSRSDWQIVQEALEMVRMEEFRDRQIGQLSGGQQQRVFMARALTQG
ADILLLDEPFAGVDAATERAILDVLDRAKKSGRTLLVVHHDLTTAGEYFDLLMLIKQRLYAYGSPETVLNPGLLSEVYEG
KLRVFSGLKAQEESG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-43 44
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-43 44
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-47 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-47 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-48 44
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 3e-48 44
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 2e-48 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_4314 YP_006449212.1 ATPase component of Mn/Zn ABC-type transporter BAC0400 Protein 2e-50 50
Desti_4314 YP_006449212.1 ATPase component of Mn/Zn ABC-type transporter BAC0350 Protein 1e-48 44
Desti_4314 YP_006449212.1 ATPase component of Mn/Zn ABC-type transporter BAC0440 Protein 7e-45 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_4314 YP_006449212.1 ATPase component of Mn/Zn ABC-type transporter VFG0526 Protein 1e-48 44