Gene Information

Name : Desti_3534 (Desti_3534)
Accession : YP_006448448.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Virulence
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4149256 - 4149963 bp
Length : 708 bp
Strand : +
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence :
ATGGCCGGCAGAAATGTATTAATTGTAGAAGACGAATCCAAAATTGCCGAGTTGCTGCGGGATTATCTTATCGCGGCCGG
TTTTGTTGTAACCATTGTCGGGCGTGGAGATTTGGCGGCCGGGGAAGTGCGGAAGACCTCGCCTGCACTGGTGCTTCTGG
ATATCATGTTGCCTGGAATGGATGGAATGGATGTGTGTAGAGAAATCAGGAGATTTTCTACCGTTCCTATTATTATGCTT
ACTGCCCGTGTGGAAGAAATCGACCGGGTCATCGGGCTGGAATTGGGTGCAGACGACTATGTATGCAAACCGTTCAGCCC
GAGGGAAATAGTAGCGCGGGTAAAAGCCGTGCTCAGACGCACACAGCCGGAGCCTGGAGAACCTAAGCTGGAGGTGGGCC
CGATCTTGATGGACTGTGATACGCGCGAAGTCACTCTCAGAGGAATTCCCGTGAGTCTTACCCCCAGTGAGTTCGCTCTT
CTCAAAGCATTAATGGAACGGCCGAACCGCGTATTTACTCGCGGAGAGCTTCTGAATCTCGTTCAAGGCTACAATTTCGA
TGGGTATGAGCGAACTATCGATTCGCACATCAAGAATTTGCGAAAAAAGATGGCAGAAAACTTTGCGGACCAGGAACTCA
TAAGCACGGTACACGGGGTTGGGTACAAACTCGCTGTGGTTGACCGCGTTCCGGGAGGTGACGGCTAA

Protein sequence :
MAGRNVLIVEDESKIAELLRDYLIAAGFVVTIVGRGDLAAGEVRKTSPALVLLDIMLPGMDGMDVCREIRRFSTVPIIML
TARVEEIDRVIGLELGADDYVCKPFSPREIVARVKAVLRRTQPEPGEPKLEVGPILMDCDTREVTLRGIPVSLTPSEFAL
LKALMERPNRVFTRGELLNLVQGYNFDGYERTIDSHIKNLRKKMAENFADQELISTVHGVGYKLAVVDRVPGGDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-29 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 1e-28 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000647.1.gene2531. Protein 1e-54 52
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001918.1.gene3444. Protein 1e-54 52
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP001138.1.gene2239. Protein 8e-54 51
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene2186. Protein 1e-54 51
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002695.1.916589.p Protein 7e-55 51
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0596 Protein 8e-54 51
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0039 Protein 1e-54 51
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002952.2859905.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007793.3914279.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002745.1124361.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009782.5559369.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002951.3237708.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_003923.1003749.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_002758.1121668.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_007622.3794472.p0 Protein 9e-45 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009641.5332272.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_013450.8614421.p0 Protein 1e-44 48
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010400.5986590.p0 Protein 6e-44 47
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002989.p0 Protein 2e-45 47
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011595.7057856.p0 Protein 2e-45 47
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE000516.2.gene3505. Protein 6e-40 47
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene1676. Protein 8e-46 43
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000034.1.gene3671. Protein 2e-39 43
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_009085.4919120.p0 Protein 4e-29 43
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain FJ349556.1.orf0.gene Protein 6e-36 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7686381. Protein 1e-36 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 2e-30 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain HE999704.1.gene2815. Protein 2e-38 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 5e-32 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE016830.1.gene1681. Protein 8e-37 41
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 1e-31 41
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 3e-42 41
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-35 41
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_011586.7046392.p0 Protein 2e-32 41
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_010410.6002907.p0 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 5e-30 42
Desti_3534 YP_006448448.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1386 Protein 2e-32 41