Gene Information

Name : Desti_2964 (Desti_2964)
Accession : YP_006447897.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3481225 - 3483816 bp
Length : 2592 bp
Strand : +
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB

DNA sequence :
ATGCGAGCAGACAAATTCACGCTCAAATCCCAGGAAGCCCTGGAGCTTGCACAGAATACAGCAGCGAATAGGGGCAATCC
GCAAGTGGAGGTCGAACACCTGTTGCTCGCTCTTTTATCCGATGAGGAAGGGTTACCGGTCGAAATAGTAAAAAAGCTCG
GAACCGATCTGGACAGGATTCGAAACGAAACCCTGAAGGCTGTGGAACGGCTGCCTACCCAAAGCGGGACCACGACCGCG
GATCGGTATTTCTCGAATCAGCTTCGGGAGGTCCTTGAAAAAGCGTTCAAGGAAATGGAACAACTCAAGGACGAGTATCT
CTCCGTGGAACATATGTTGATCGCGATTGCCGAGTCTTCCGGAACGCAAGCGGGCAAGATATTGACATCCCGTGGAGTGA
CCAAAGACAAAATATACGTTGTTCTGACGGATATTCGAGGGACGCAGCGGGTTACCGATCAATCACCCGAAGAAAAGTAT
CAGGCACTGAAACGATTTACCAAAGATTTGACCGAGCTCGCCCGCAAAGGAAAGCTCGATCCGGTGATAGGACGTGATGA
AGAAATCAGGCGCATTATTCAGGTGCTCTCCCGCAGGACAAAGAATAATCCGGTGTTGATCGGCGATCCTGGAGTGGGAA
AGACTGCCATTGTTGAGGGACTCGCTTCACGCATAATTTCGGGTGATATTCCGGAAAGCCTCAAGGGAAAACGGGTACTC
GCACTCGATCTCGGTCAGTTGATAGCCGGAGCCAAATATCGAGGTGAATTTGAAGACAGGCTGAAAGCCGTTTTGAAAGA
GATCACCGGAGCATCCGGTGAGATAATCCTGTTCATCGATGAAATGCACACGCTGGTAGGAGCTGGAGCGGCAGAAGGTG
CAGTGGACGCCTCCAATATGTTGAAGCCGCCTCTTGCACGGGGAGAGCTCAGGGCAATCGGTGCAACCACAGTCGAAGAA
TATCGGAAATACATTGAGAAGGATAAGGCTCTCGAGCGCAGATTTCAGCCTATTTACGTTGCCGAGCCTTCTGTCGAGGA
TACCATTTCCATATTGCGCGGCCTCAAGGAGCGCTATGAACTTCATCACGGTGTGAGGATTCAGGACGCGGCGATTATTG
CGGCAGCCACCCTTTCCCATCGATACATTACGGATCGGTTTCTCCCGGACAAGGCTGTGGACCTGATTGACGAGGCTTCT
TCCCGGCTCAGAATCGAAATCGATTCCATGCCGACGGAGATCGATACAATCGAGAGAAGGATCATTCAGCTCCAGATCGA
AGAACAGGCGCTCACTAAAGAATCCGATCCGGCCAGCAAAGAACGGCTGCAAAAGGTAAAATTCGAGATCGAGCGTCTCG
CCGACGAATCCAATGCTCTGAAAGAAGAATGGCAGAAAGAGAAGAAGATCATCTCCGGAATTCGTGAACTGAAAGAGCGA
CTGGAGCGAGCAAAAGTCGATGCTGTGAAGGCGGAGCGAGAAGGGAATCTGTCCAAAGCTGCGGAACTGAAGTACGGGAT
GATCATCTCGCTCGAAAAGGATATTGCTGCCAAGAACGAGGAATTGGAAAATCTTCAAAAAGGCGGAGGCCTCCTCAAAG
AAGAAGTCGGCCCCGAAGATGTCGCGGAGGTCGTGGCCAAGTGGACGGGGATTCCTGTCTCCAAGATGCTGGAAGGCGAA
TTGGACAAGCTGCTCAAAATGGAGGAGCGGCTTTCCCAGCGTGTCGTGGGACAGCCTGAAGCTATCGTAGCTGTATCGGA
TGCGGTTCGCCGTGCACGATCCGGTTTGCACGACCCGAATCGTCCCATCGGATCGTTCATTTTTCTCGGTCCGACCGGCG
TGGGCAAGACAGAGCTGGCCCGGGCGCTCGCGGAATTCCTCTTTGACGACGAGCAGGCCATTGTCCGGGTGGACATGTCC
GAGTACATGGAGCGGCATTCAGTCGCGCGGCTCATAGGAGCGCCTCCCGGGTATGTCGGGTACGAGGAAGGAGGGTACCT
CACGGAAGCAGTACGGAGACGCCCCTATTCAGTCGTGTTGTTCGACGAAATCGAAAAAGCGCATCCGGAGGTGTTCAATG
CGTTGCTCCAGATTCTCGATGACGGCAGGCTCACCGATGGCAAGGGCCGAACGGTTGATTTCAAGAACACCATCATCATC
ATGACGTCCAATATCGGTTCCAGCGAAATCCGGGAGCTTGCGGGAGTAAGCGAAGAGCGGATGCGTCAACGGGTGATGGA
TGCTCTGAGAGCGCACTTTAAGCCTGAGTTCCTCAATCGGCTCGACGACATTATCATCTTCCATGCGCTCACGAAGGACC
AGATCAAGAAGATCGTGGATATCCAGATGAATCGCCTCAACAAAAGACTTGCAGAAAGCAAGCTTCACCTGGTGTTGGAC
GACGGAGCACGGGAACTGCTGTCTTCCGAGGGATTCGACCCTGCATACGGGGCTCGGCCATTGAAACGTGCCATTCAGCG
GTTAATCGAGAACAGGCTGTCACTGGATCTCCTGAAAGGACGATTCCAACCCGGCGACACCATTGTTGCTAAAGTGGATG
GAAATCAACTCGCATTCGATAAAGCTGCGTAG

Protein sequence :
MRADKFTLKSQEALELAQNTAANRGNPQVEVEHLLLALLSDEEGLPVEIVKKLGTDLDRIRNETLKAVERLPTQSGTTTA
DRYFSNQLREVLEKAFKEMEQLKDEYLSVEHMLIAIAESSGTQAGKILTSRGVTKDKIYVVLTDIRGTQRVTDQSPEEKY
QALKRFTKDLTELARKGKLDPVIGRDEEIRRIIQVLSRRTKNNPVLIGDPGVGKTAIVEGLASRIISGDIPESLKGKRVL
ALDLGQLIAGAKYRGEFEDRLKAVLKEITGASGEIILFIDEMHTLVGAGAAEGAVDASNMLKPPLARGELRAIGATTVEE
YRKYIEKDKALERRFQPIYVAEPSVEDTISILRGLKERYELHHGVRIQDAAIIAAATLSHRYITDRFLPDKAVDLIDEAS
SRLRIEIDSMPTEIDTIERRIIQLQIEEQALTKESDPASKERLQKVKFEIERLADESNALKEEWQKEKKIISGIRELKER
LERAKVDAVKAEREGNLSKAAELKYGMIISLEKDIAAKNEELENLQKGGGLLKEEVGPEDVAEVVAKWTGIPVSKMLEGE
LDKLLKMEERLSQRVVGQPEAIVAVSDAVRRARSGLHDPNRPIGSFIFLGPTGVGKTELARALAEFLFDDEQAIVRVDMS
EYMERHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVVLFDEIEKAHPEVFNALLQILDDGRLTDGKGRTVDFKNTIII
MTSNIGSSEIRELAGVSEERMRQRVMDALRAHFKPEFLNRLDDIIIFHALTKDQIKKIVDIQMNRLNKRLAESKLHLVLD
DGARELLSSEGFDPAYGARPLKRAIQRLIENRLSLDLLKGRFQPGDTIVAKVDGNQLAFDKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 6e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 2e-106 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_2964 YP_006447897.1 ATP-dependent chaperone ClpB VFG2084 Protein 6e-109 43