Gene Information

Name : Desti_1859 (Desti_1859)
Accession : YP_006446831.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Resistance
Product : ABC-type spermidine/putrescine transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2235357 - 2236094 bp
Length : 738 bp
Strand : -
Note : PFAM: ABC transporter

DNA sequence : 
TTGATCAGTCTAAACGTATGCAAATGTCTGCGAGGTGCTCAGGGCCCTTTTGTATTGCATCCAGCATTCACGATCCCCAG
AGGACAGTTCGTCGTTTTGAATGGAACTTCCGGAACCGGCAAGACAACTTTGCTACGTATGTTGGCAGGTCTTGAGACAC
CGGATGATGGACGTATCCTGGTGGACGGAGAGACGTGGTTCGATAAGAATGAACGGGTTTGCGTGCCCCCTCAGAAGAGG
AGCATCGGATTTGTATTTCAAAATTATGCGCTCTTTCCATCCATGACCGTGAGGCGCAATCTGGAATTTGCTGCAGGCCG
CCGAAAAGATCCTCGAGTAGACATGTTTCTGTCAATGATTGAACTGGAAGAGCTGCAGTACAGATATCCGGAAGAACTGT
CAGGAGGCCAGCAGCAGAGAGTAGCTTTGGCACGAGCCTTGATCCGACGGCCGAAGATCCTTCTTCTTGACGAACCGCTT
TCCGCACTGGATGAGGCCATAAGGGAAAAGCTTCAGGAGGAAATCCTGCGTCTGCACCAAGAACTGGGACTCACGAGCAT
TCTCGTGTCACATGATCGAGCTGAAATTCTTCGTATGGGAGATCGCATCCTTGTCCTTCAAGAGGGTGGATTGACCTGTG
AAGGTCCCCCATTCCATATAATCACGCGACCGGATGAGAAGAACGGATCGGGAGTGATCTCAGCCGGGTCCGGAAATCCG
GCAAGGAGAAGCACTTAG

Protein sequence : 
MISLNVCKCLRGAQGPFVLHPAFTIPRGQFVVLNGTSGTGKTTLLRMLAGLETPDDGRILVDGETWFDKNERVCVPPQKR
SIGFVFQNYALFPSMTVRRNLEFAAGRRKDPRVDMFLSMIELEELQYRYPEELSGGQQQRVALARALIRRPKILLLDEPL
SALDEAIREKLQEEILRLHQELGLTSILVSHDRAEILRMGDRILVLQEGGLTCEGPPFHIITRPDEKNGSGVISAGSGNP
ARRST

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-32 43
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_1859 YP_006446831.1 ABC-type spermidine/putrescine transport system, ATPase component BAC0600 Protein 2e-34 42