Gene Information

Name : Desti_1226 (Desti_1226)
Accession : YP_006446203.1
Strain : Desulfomonile tiedjei DSM 6799
Genome accession: NC_018025
Putative virulence/resistance : Virulence
Product : nucleoside-diphosphate-sugar epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460136 - 1461113 bp
Length : 978 bp
Strand : +
Note : PFAM: NAD dependent epimerase/dehydratase family

DNA sequence :
ATGACAATGAACAGGAGCCGACGGCTCATACTTGTGACGGGAGGTGCGGGATTTATCGGAAGCCACCTCGTTGAAGGCCT
TTTGGAGAGGGGCGAAGCGGTCCGGGTGCTGGATAACCTGAGCACCGGGAAGCAGGAAAATCTCATGGGACTTGGGAACG
GTCGATGGAATGCGCACCGTGATTTCGAGTTTATCCTTGGGGATATTCGAGACAGGAAGATCGTGCAGACTGCAATGAAC
GGTGTGGACGCAGTTTTCCACCAGGCCGCGCTCGGAAGCGTTCCCAGATCTGTTACCGATCCTGTGACCACCCAGGAAGT
AAATGCCGATGGTACCTTGAATATTCTTCAGTCAGCCCGGGATGCTGGAGTCTCCCGAGTAGTGTATGCGTCCTCGTCTT
CCGTGTATGGAAATAGTGAATTGCTGCCAAAAAGGGAAGGGGAGGAAGGCTTGACCCTGTCCCCCTACGCGCTCACAAAA
AGGGTCAACGAAGAATACGGGCGATTATTCATGGGGCTTTATGCCTTCGAGACGATCGGTCTACGTTATTTTAACGTGTA
CGGACCCAGACAAGATCCCGAGTCTGAATACGCTGCAGTTATTCCCCGCTTTGTCACTGCATTACTCAAGAAAAGTGAGC
CGATCATATATGGAACCGGGCTTCAGAGCAGAGATTTTACCTTTGTGAAGGACGTGGTACGTGCCAATATTCTGGCATTG
GAAGCGCCTCCCTTCGCATGCGGGAGATCCTTCAACATAGGGTGTGGAACTCAGGCGACTCTCCTTGAACTACTTTCGGC
ACTGCAGGATCTTTTAGGAACAAACATTGAACCTCGTTTCGAGTCTCCAAGAGCAGGCGATGTAATGCATTCTTCTGCGG
ATACAGGCCTTTCAGAAAAAATGTTGGGATTCAAAGCGGAGTTCGACTTGCGTCTCGGACTGGCCCAAAGTATTGCATGG
TATAGAGAAAATCTGTAA

Protein sequence :
MTMNRSRRLILVTGGAGFIGSHLVEGLLERGEAVRVLDNLSTGKQENLMGLGNGRWNAHRDFEFILGDIRDRKIVQTAMN
GVDAVFHQAALGSVPRSVTDPVTTQEVNADGTLNILQSARDAGVSRVVYASSSSVYGNSELLPKREGEEGLTLSPYALTK
RVNEEYGRLFMGLYAFETIGLRYFNVYGPRQDPESEYAAVIPRFVTALLKKSEPIIYGTGLQSRDFTFVKDVVRANILAL
EAPPFACGRSFNIGCGTQATLLELLSALQDLLGTNIEPRFESPRAGDVMHSSADTGLSEKMLGFKAEFDLRLGLAQSIAW
YRENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 3e-46 44
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 3e-46 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desti_1226 YP_006446203.1 nucleoside-diphosphate-sugar epimerase VFG0430 Protein 1e-46 44