Gene Information

Name : Anamo_2012 (Anamo_2012)
Accession : YP_006444920.1
Strain : Anaerobaculum mobile DSM 13181
Genome accession: NC_018024
Putative virulence/resistance : Virulence
Product : type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2060971 - 2062665 bp
Length : 1695 bp
Strand : -
Note : PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E

DNA sequence :
ATGAATAACAGAGATAAGCAAGTCGAACGAAAGCCTCTCTTAGGCCAGATCCTCGTCGAGCAGGGCTACATACTGCCCGA
ACAGCTTGACTTGGCCCTTAAGGAACAGTCCGTGACGAACCTGCGCATCGGCGAGATCCTGGTCAAAAACGGTTGGGTCA
CGGAAAGGGATCTGGCAGAGGCCATCTCCAAGCAGACGAAGCTCCCCTTCGTGTCCCTGTCCATGTTTCGCCCCATGCAG
GAGGCCATTGACACCATCCCCGAGAGCATGGCCAGGAGGCTCGAGGTCGTCCCCCTTTCCATAGACGAAAACGCAAACAA
GCTGACCGTCGCGGTATCCGACCCCTTCAACATACTGGCCTTGGATGAGATACGGATGATAACGGGCATGGATCTGGACT
TGATGATAGCCACCCTTTCGGACATAAAGCGCGCCATAGAGACCTTCTACAGCATAAGGTCGAGCATAGATGAGGCGCTG
GTCGAGGTGGTTGAAGAGGAAAGGGGAGAGTTCGACCTGTCGAAGACGGAAGAGGCCGTCTCCATAGACGACGCCCCAGT
GGTCAAGCTCGTCAACACCATATTGGGACAGGCCGTTGACAACAGCGCCTCCGACGTCCACGTCGAGCCCTTCGAGACTG
AGACGCGCGTGCGCTACAGGATAGACGGGGTGTTGTTCGACATGCTCACCTTCCCCAAGCACCTTCATCCCCCCGTGTCC
TCGCGAATAAAGATAATGTCGGGCATGGACATCGCCGAAAAGCGCCACCCCCAGGACGGCAGGATCCTCCTCCGGGCGGC
GGGCAGGCGCATTGACATCAGGGTCTCGAGCCTGCCGACCATCTACGGCGAAAAGCTGGTCATGCGACTGCTCGATCAGG
CGACGGCCATGGTGGGCCTGGAGAAGCTTGGACTGGATCCGGGCGAGAAGACCCTCTTGGATAAAATAATAGCCGTGCCC
TACGGCATAATACTTGTTACGGGCCCTACGGGAAGCGGAAAATCGACCACCCTTTATTCCATACTGCAGACCCTTAACTC
CTACGACGTCAACATAACCACGGTCGAGGACCCCGTAGAGTACACCATTACAGGCGTCAACCAGGTGCAGATAAACGAGA
AGGCTGGCCTGACATTTGACAGCGTCTTAAGGTCCATCCTGAGGCAGGATCCAGACATCATACTGGTCGGCGAGATGCGC
GACACCGAGACGGCACAGCTGGCAGTCAGGGCGGCCCTGACGGGACATCTGGTGCTGTCGACCCTTCATACAAACGACGC
CCCCAGTTCCATCATAAGGATGATAGACATGGGGATACCTCCCTTCCTGGTGTCCTCCTCGGTGGTTGCCGTCATGGCCC
AGAGATTGGTGAGAAAGTTGTGTCCGCGCTGCAAACAGCCCTACGAACTGCCCCTCGACGTTGCAGAAAGCCTCGGGCTT
GACGGGTTTACGACCGTTTATAGGCCCGTGGGATGTGAGGAATGCCGCGGCACGGGCTACAGGGGCAGGACGGCAATTTT
CGAGATCATGCCCATGTCCGAGGAGATAAGGAGGGCCGTGATGACGGGGGCCACTTCCGACGACCTTCGCGCCATGGCCA
TAGATCAGGGCATGAGGACCCTTCGTACATCGGGTGCAGTAAAGGTGAAGGCGGGAATAACGAGCGCCGACGAAGTGCTG
TCGGTGACCCTGTGA

Protein sequence :
MNNRDKQVERKPLLGQILVEQGYILPEQLDLALKEQSVTNLRIGEILVKNGWVTERDLAEAISKQTKLPFVSLSMFRPMQ
EAIDTIPESMARRLEVVPLSIDENANKLTVAVSDPFNILALDEIRMITGMDLDLMIATLSDIKRAIETFYSIRSSIDEAL
VEVVEEERGEFDLSKTEEAVSIDDAPVVKLVNTILGQAVDNSASDVHVEPFETETRVRYRIDGVLFDMLTFPKHLHPPVS
SRIKIMSGMDIAEKRHPQDGRILLRAAGRRIDIRVSSLPTIYGEKLVMRLLDQATAMVGLEKLGLDPGEKTLLDKIIAVP
YGIILVTGPTGSGKSTTLYSILQTLNSYDVNITTVEDPVEYTITGVNQVQINEKAGLTFDSVLRSILRQDPDIILVGEMR
DTETAQLAVRAALTGHLVLSTLHTNDAPSSIIRMIDMGIPPFLVSSSVVAVMAQRLVRKLCPRCKQPYELPLDVAESLGL
DGFTTVYRPVGCEECRGTGYRGRTAIFEIMPMSEEIRRAVMTGATSDDLRAMAIDQGMRTLRTSGAVKVKAGITSADEVL
SVTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 2e-89 50
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-89 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anamo_2012 YP_006444920.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2048 Protein 9e-91 51
Anamo_2012 YP_006444920.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG2426 Protein 5e-86 48
Anamo_2012 YP_006444920.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG0182 Protein 8e-95 47
Anamo_2012 YP_006444920.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG1880 Protein 4e-95 46
Anamo_2012 YP_006444920.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB VFG1876 Protein 8e-88 44