Gene Information

Name : Anamo_1970 (Anamo_1970)
Accession : YP_006444879.1
Strain : Anaerobaculum mobile DSM 13181
Genome accession: NC_018024
Putative virulence/resistance : Virulence
Product : TRAP transporter subunit DctM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2018710 - 2019999 bp
Length : 1290 bp
Strand : +
Note : PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit

DNA sequence :
ATGAGTCTGCTTCTTTTGCTGCTATTCTTCTTTTTTCTCATGTTAATCGGCCTTCCCCTTTACCTTGCGCTGCTGTCGGT
CGCCTTTGCCGGGATAGCGGTATTGGGTGACGCATCACTTCTTCGCGTAGTAAGCCAGCAGCTCTTTGGCGGGATGGATT
CCTTTACCCTGATGGCCATCCCCTTTTTCGTCCTGGCCGGGTCTTTGATGAACAGATCGGGCCTTACCGATAAACTCATA
GACTTTTCCAAGCTCCTAGTGGGCTCCATGCGCGGCGGGCTGGGATACGTAAACATAGTTGCAGGCATAATACTGGCAGG
CGTAAACGGGTCAGCAGCTGCAGATGCCTCTGCCCTTTCTTCGATCTTAATCCCGGCCATGAAAAAGGAAGGCTACAACC
AAGGTTATGCTGCAGGCCTTACCGCCGCAAGCTCTCTCATCGGCCCCATAATACCTCCTTCGATCTTCATGATCATTTAC
GCCTCCATGACAAACACGTCGATCGGCGGTCTTTTTGCAGCCGGCGTCGTTCCGGGGTTGATTTTAGGCCTATCCTATGC
TGTCATGAATTACTTCTATTCTTTCAGATACGGTGCTCCGATTTCGAGCGGAGAAGAAAGGTCGCAGGCAAAAAAGATAC
TAATTCAATCCATATCCGGCTTACTTGCGCCAATAATAATCATCGGCGGAATCGTCACAGGCGTTGTGACCCCTACGGAA
TCTGGGGCATTGGCTGCCGCTTACTGCCTCTTGATAGGGCTGTTTTACACCAAAAAGCTCGACAAAAGGGGCATTTTCGA
GGCACTTTACGAGACGGTGCGCACGACCAGCTCCATATTTCTAATCATGGGCGCGGCCCAAGCAGTCGGCTGGTTACTCA
AATGGGAAAGAATACCGCAGCATTTTGCGGGGTTGCTTGCCGGAGCAGGGTTGACCTCAAGCCCCGTTTTGCTCATGTTG
ACCTTCAGCGCCATCATATTCGTGGTGGGTTGTTTTATGGAAGAAGTGGCGACACTTACCCTTCTTACGCCCATATTTTA
TCCGCTGGCCATGCAGGCGGGCATTGACCCGCTGCATTTTGGCATCGTTATGACGCTAAATGTCACCATTGCCCTGGTAA
CCCCTCCTATGGGTGCTTGTAACTACATCGTTTCTGCGGTGGGCAAGGTGCCTTTAAGTGAGGTATTGAAGTTCATATGG
CCCTTCATAGCTGTCTCTCTTGTTGCCCTCGTTTTAATCATACTATTTCCCATTATAACTATATATATCCCTAAAGCTCT
GGGGCTTTGA

Protein sequence :
MSLLLLLLFFFFLMLIGLPLYLALLSVAFAGIAVLGDASLLRVVSQQLFGGMDSFTLMAIPFFVLAGSLMNRSGLTDKLI
DFSKLLVGSMRGGLGYVNIVAGIILAGVNGSAAADASALSSILIPAMKKEGYNQGYAAGLTAASSLIGPIIPPSIFMIIY
ASMTNTSIGGLFAAGVVPGLILGLSYAVMNYFYSFRYGAPISSGEERSQAKKILIQSISGLLAPIIIIGGIVTGVVTPTE
SGALAAAYCLLIGLFYTKKLDKRGIFEALYETVRTTSSIFLIMGAAQAVGWLLKWERIPQHFAGLLAGAGLTSSPVLLML
TFSAIIFVVGCFMEEVATLTLLTPIFYPLAMQAGIDPLHFGIVMTLNVTIALVTPPMGACNYIVSAVGKVPLSEVLKFIW
PFIAVSLVALVLIILFPIITIYIPKALGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 3e-38 41
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 4e-38 41
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 4e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anamo_1970 YP_006444879.1 TRAP transporter subunit DctM VFG1110 Protein 2e-38 41