Gene Information

Name : Anamo_1880 (Anamo_1880)
Accession : YP_006444791.1
Strain : Anaerobaculum mobile DSM 13181
Genome accession: NC_018024
Putative virulence/resistance : Resistance
Product : response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1913035 - 1913721 bp
Length : 687 bp
Strand : -
Note : PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal

DNA sequence : 
ATGATGAGGGTTTTGATAGCAGACGACGATACCTCTCTCCTCGAACAACTTCGAGAGATCTTGGCCAGCGAGCGCTACAC
GGTAGATACTGCAAGCAACGGAATCGAGGCCATGGATAAGCTTTATGATGCCGTCTTCGATTTGGTGATACTGGACGTCA
TGATGCCCCATATAGATGGGTTGAGTTTGCTTGAGCAAATGCGAAAAGGTGGGATCAATATTCCGGTGTTAATGCTTACG
GCAAAGGGGGACGTGGAGGACAAGGTCAAAGGGCTTAATCTCGGAGCTGATGACTATCTGGCAAAACCTTTTTCTATCGA
CGAATTGCTTGCGCGCGTTCGCGCTTTATTGAGGAGATCCGAAGGCCGGCATAGTGCGATTTTGGATGCCAAAGGACTGA
GGTTAGACACGGTAAGCCGTAAGGTCACGAAAGATGGAGAGCCGATAGATCTCACCCAAAAAGAGTTTTTAATCTTAGAA
TTTTTGCTTTACAACAAAAATAGGGTCGTATCACGTTTCAGTTTGGCTGAACATGTATGGGGGGACGCCTTTGATCCCTT
TACCATGTCTAATTTCATAGATGTTCATATTAAAAATTTGCGCCGTAAACTCGGTGATGCCGGGAACGATAAAATCATTC
AGACCGTACGCAGCGTTGGTTATATGATCGAAGATGGTGAACAATGA

Protein sequence : 
MMRVLIADDDTSLLEQLREILASERYTVDTASNGIEAMDKLYDAVFDLVILDVMMPHIDGLSLLEQMRKGGINIPVLMLT
AKGDVEDKVKGLNLGADDYLAKPFSIDELLARVRALLRRSEGRHSAILDAKGLRLDTVSRKVTKDGEPIDLTQKEFLILE
FLLYNKNRVVSRFSLAEHVWGDAFDPFTMSNFIDVHIKNLRRKLGDAGNDKIIQTVRSVGYMIEDGEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nisR2 YP_006309922.1 NisR Not tested FWisland_1 Protein 4e-13 42
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 5e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0347 Protein 1e-31 45
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0111 Protein 1e-33 44
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0487 Protein 2e-26 43
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0083 Protein 4e-35 42
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0308 Protein 6e-33 42
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0197 Protein 3e-34 42
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain AE015929.1.gene1106. Protein 5e-26 41
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP004022.1.gene3215. Protein 5e-28 41
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain CP000675.2.gene1535. Protein 5e-29 41
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain BAC0125 Protein 1e-34 41
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain NC_012469.1.7685629. Protein 2e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG1390 Protein 2e-35 42
Anamo_1880 YP_006444791.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain VFG0596 Protein 2e-32 41