Gene Information

Name : Anamo_1538 (Anamo_1538)
Accession : YP_006444464.1
Strain : Anaerobaculum mobile DSM 13181
Genome accession: NC_018024
Putative virulence/resistance : Virulence
Product : chaperone ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1528094 - 1530583 bp
Length : 2490 bp
Strand : -
Note : PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif

DNA sequence :
ATGTGGCAATTTTTTACGGAGCGAGCAAGGAGGGTAATTCAATTAGCTCATCGTGAAGCCTTGAGATTGGGTCACGATGT
GATCGGCACGGAACATATATTGCTTGGGCTGTTAGCCGAAGGCGATGGAGTGGCGGCTCATGTGTTGATGTCACTGGGTA
TAGATTTAGATGAAGTTAGAAAAAGAGTGGAACAACTCGTGGGCAAAGGTCAGCCAAAGGATAAACCAATAGATCTTCCC
TTAAGCCCAAGGGCTAAGCGTGTCTTGGATTTAGCCATGAGGGAAGCCCGCAACATGGGCGTCAATTATGTCGGCACTGA
ACATATACTGCTTGGGCTGTTAGCCGAAGGCGAAGGCATAGCTGCTCAAGTGCTCATGAGCATGGGCCTTGACACGCAAA
AAGTATATCAGGAAGTTATTCGTTACCTTTCTGGAGGGGAGGTGGATCAAATGAGCCAATCTCCTGGGTTATCCAAGAAG
AAATCTCACACAAAGACGCCTACGCTTGATCAGCTGGGCATCGATTTGGTTGAAATGGCGCGTCGCGGCGAACTTGATCC
CGTCATCGGAAGGGAAAAGGAAATACAGCGCGTCATTCAAATTTTGTCACGCAGGACCAAAAATAACCCCTGCCTCATTG
GAGATCCTGGGGTCGGTAAAACTGCAATAGTAGAGGGCTTGGCTCAAAAGATTGCCCTTGGTGAGGTGCCCGAGTTGCTG
AAGAACAAGCGCATTGTGCAGCTTAATATCGGGAACCTTGTTGCGGGCACCAAATACAGGGGCGAATTTGAAGAGCGGAT
GAGGAAGTTGATAAAGGAAGTTCGCGATTCAAGGGACGTTATTGTGTTCATCGATGAAATTCATACCTTGGTTGGCGCTG
GAGGAGCAGAAGGAGCTGTCGATGCAGCTAATATCTTGAAGCCAAGCCTTGCTAAGGGAGAGTTTCAGGTGATTGGGGCA
ACGACGCTTGATGAATATAGAAAATACATTGAAAAGGATGCCGCCCTGGAACGCAGGTTCCAGCCCGTTTTCGTGGGCGA
ACCCACAATTGAGGATACCATTGAGATCCTAAAGGGCCTTCGGGATAAGTACGAAGCGCACCATAGGGTGAAATATACCG
ATGCTGCCCTTGAAGCAGCTGCCAAGCTATCCGCCCGATACATAAGCGACAGATTTTTGCCCGATAAGGCCATAGATCTT
ATCGATGAAGCCGGGGCGAGGGTGCGGCTTTCTGCCATGAATCCTCCTGACTTCATAAAGGAGCTTGAAAAAAAGCTTGA
GACAGTCAGAAAGGAAAAGGAAGCCGCCGTGGCATCTCAGGAGTTTGAAAAAGCTGCTGCTTTAAGAGATCAAGAAAGAA
AGCTCTCCGAAGAGCTCGAGGAGAAGCGCAAGGCATGGCAAGCCAAGAACTCGCAAGAAGAGCCGATTGTCGATGAAGAG
GATATAGCCTTGATTGTTTCCGAATGGACAGGCATTCCCGTAATGCAGCTTACTGAGGAAGAAAGCCAAAGGCTCCTGCG
TATGGAAGAGGAGATCCATAAACGCATAATCGATCAGGAGGAGGCGGTCTCAGTCGTTGCCAGGGCAATAAGGAGGGCCA
GAAGCGGTCTGAAGGATCCCAAGCGACCCATCGGAAGTTTCCTCTTCTTAGGGCCTACGGGTGTTGGCAAGACTGAGCTG
AGCAAGGCGTTGGCCGAATTCCTATTTGGCGATGAGAATTCCATGATTAGGCTCGACATGAGCGAGTTCATGGAGCGCCA
CGAGGTATCAAAACTAATTGGTGCACCTCCTGGCTACGTCGGTTACGAAGAGGGAGGTAAGCTGACCGAAGCAGTCAGAA
GGCGTCCATATGCTGTAGTGCTCTTCGACGAGATAGAAAAGGCTCATCCTGACGTATTTAACATACTTTTGCAGATACTA
GAGGATGGGAGGTTGACCGACGGACAGGGTCGCGTGGTAGATTTTAAGAATACGGTGATCATAATGACCAGTAACCTTGG
TGCCCAGGACCTGATGAAGGGACCAAGCATAGGATTTAGCGTCACTTCTGAGAGCGGTCTAGACTTTGAAGATGCAAAGA
AAAACATCCTTGAAGCTGTTAGAAGGACGTTTAGGCCGGAGTTTATAAACAGGATCGACGAGATAGTTGTCTTTAAACCT
TTGGCCGAAAAGGAACTGTTGCAAATTGTGGACCTCATGATAAAGGATGTGGCGAAAAGGTTAGCGGAAAAGGGCTTGAT
AATTGAAGTTACTGACGCAGCGAAGAATTTCTTGCTCAAAAAGGGATACGAGCCTAAATTTGGTGCACGCCCATTAAGGC
GTACGATACAACGATATATTGAGGATAAATTGGCCGATATATTGCTCGAAGGCAAGATAAAACCCGGTGAGGTGATCAAA
GTAGACGTTGCCGATGATGATATAGCGTTTACGCCCATTCAAGATGAAGGCCCAATTAAGGCAAGCGGTCAAGGGGTTGC
GCAAGCCTAA

Protein sequence :
MWQFFTERARRVIQLAHREALRLGHDVIGTEHILLGLLAEGDGVAAHVLMSLGIDLDEVRKRVEQLVGKGQPKDKPIDLP
LSPRAKRVLDLAMREARNMGVNYVGTEHILLGLLAEGEGIAAQVLMSMGLDTQKVYQEVIRYLSGGEVDQMSQSPGLSKK
KSHTKTPTLDQLGIDLVEMARRGELDPVIGREKEIQRVIQILSRRTKNNPCLIGDPGVGKTAIVEGLAQKIALGEVPELL
KNKRIVQLNIGNLVAGTKYRGEFEERMRKLIKEVRDSRDVIVFIDEIHTLVGAGGAEGAVDAANILKPSLAKGEFQVIGA
TTLDEYRKYIEKDAALERRFQPVFVGEPTIEDTIEILKGLRDKYEAHHRVKYTDAALEAAAKLSARYISDRFLPDKAIDL
IDEAGARVRLSAMNPPDFIKELEKKLETVRKEKEAAVASQEFEKAAALRDQERKLSEELEEKRKAWQAKNSQEEPIVDEE
DIALIVSEWTGIPVMQLTEEESQRLLRMEEEIHKRIIDQEEAVSVVARAIRRARSGLKDPKRPIGSFLFLGPTGVGKTEL
SKALAEFLFGDENSMIRLDMSEFMERHEVSKLIGAPPGYVGYEEGGKLTEAVRRRPYAVVLFDEIEKAHPDVFNILLQIL
EDGRLTDGQGRVVDFKNTVIIMTSNLGAQDLMKGPSIGFSVTSESGLDFEDAKKNILEAVRRTFRPEFINRIDEIVVFKP
LAEKELLQIVDLMIKDVAKRLAEKGLIIEVTDAAKNFLLKKGYEPKFGARPLRRTIQRYIEDKLADILLEGKIKPGEVIK
VDVADDDIAFTPIQDEGPIKASGQGVAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 59
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 9e-84 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Anamo_1538 YP_006444464.1 chaperone ATPase VFG0079 Protein 0.0 60
Anamo_1538 YP_006444464.1 chaperone ATPase VFG0080 Protein 4e-154 53