Gene Information

Name : Mycch_5752 (Mycch_5752)
Accession : YP_006442708.1
Strain :
Genome accession: NC_018022
Putative virulence/resistance : Resistance
Product : copper/silver-translocating P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 419279 - 421396 bp
Length : 2118 bp
Strand : +
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC

DNA sequence :
ATGACAGACCACGATCACCACGCCGTGGCGACATCCCACGGCGGCGCGCACAGCCACCACGGCGACCCTGGTGACCGACT
GGCCGATCACCAGTCGGGGACCGGTCACGCCGGACACGGGGGTCACGCCGGGCACGGGGCCGATCACGTGGCTCAGTTCC
GAAAACTGTTCTGGATCAACCTGATCATCGCCGTCCCGGTCGTGGCGTTCTCCACCATGTTCGCCATGCTGGTCGGCTAC
CAGGTCCCCGACGTCCCCGGTGCCCGCTGGATCGCGCCGCTGCTGGGCACGGTCATGTACGTCGTCGGCGGACGCCCCTT
CCTCACCGGCGCCCTCAGCGAGATCCGTTCCCGCAAACCGGGAATGATGCTGCTCATCGGACTGGCGATCACCGTCGCCT
TCGTCGCGTCCTGGGGTGCGAGCCTGGGCCTGCTCGACCACGAACTCGAATTCTGGTGGGAACTGGCGCTGCTCATCGTC
ATCATGCTGCTCGGGCACTGGGTGGAGATGCGCTCCCTGGCGCAGACGACCTCCGCTCTGGACTCCCTGGCGGCGCTGCT
TCCCGACGAGGCCGAGAAGGTCGACGGCGACCGAACCGTCACCGTCTCACCGGCCGACCTGCACGTCGGCGACCTCGTGA
TCGTCCGACCCGGCGGCAGCGTCCCCGCCGACGGCAGAATCGTCGACGGACGAGCCGACATGGACGAGTCGATGATCACC
GGTGAATCCCGGCCGGTGAGCCGCGGCGTCGGCGACTCCGTGACCGCTGGCACCGTCGCCACCGACTCCGGGTTGCGGGT
CGAGATCACCGCCACCGGCGACGACACCGCCCTGGCCGGAATCCAACGTCTGGTGACCGAAGCGCAGAACTCGTCCTCGC
GTGCCCAGCGCCTCGCCGACCGCGCCGCCGGGTGGCTGTTCTGGTTCGCCCTGGTAACCGCCGCCGTCACCGCGATCGCA
TGGGCGATCATCGGAGACCCCGACACCGCCGTCGTCCGCGCGATCACCGTCCTGGTCATCGCCTGCCCCCACGCTCTGGG
GTTGGCGATACCCCTGGTCGTGTCCATCGCCACCGAGCGCGCCGCCCGCGGTGGCGTGCTGATCAAGGACCGCCTCGCGC
TGGAGGCCATGCGCACCGTCGATGCCGTGCTATTCGACAAGACCGGCACGCTCACTAAGGGCGAACCCACCGTGACCGCG
ATCGAAGCCACCGGTGACCTCGACGGCGACGCCGTGCTCGCGCTCGCCGCCGCCGCCGAGACCGACAGTGAACACCCCCT
GGCACGGGCCATCGTGAGAGCCGCGCAGGACCGCGGACTCACCGTCCCCGCCGCCACGGGCTTCTCGTCCTCCCCGGCGG
TCGGTGTCACCGCCACGGTCGAGGGTCGCGGCATCCGCGTGGGCGGCCCACGCCTGCTCGAGGAGATCAACGCACCGGAA
GTCGGCGCCGCGGCCGCGTGGCGCGAGGAGGGCGCGATCATCCTGCACGTCGTCGGTGACGGCGTCGTGCTCGGCGGTCT
CCGCCTCGCCGACGAGGTCCGCCCCGAATCGCGCGACGCCGTCGACGCCCTGCACAAGCTCGGTGTTGAGGTCGTCATGA
TCACCGGTGACGCCGAGGCCGTCGCGAACGCCGTCGGCGCCGAGCTCGGCATCGACCGCGTGTTCGCCGGCGTCCGACCG
GAAGACAAGGCCTCCAAGGTCTCCGCCCTGCAGCAGGAGGGCAAGAAGGTCGCCATGGTCGGCGACGGCGTAAACGACGC
GCCCGCGCTGGCGCAGGCCGACGTCGGCATCGCGATCGGCGCCGGCACCGACGTCGCGATCGCCTCCGCCGGTGTCATCC
TCGCCAGCTCGGATCCGCGCTCGGTGCTCTCGGTCATCGAACTGTCCCGCGCCTCCTACCGCAAGATGAAGCAGAACCTT
TGGTGGGGTGCGGGTTACAACCTCATTTCCGTGCCGCTGGCCGCCGGTGTGCTCGCACCGATCGGGTTCGTCCTGCCCAT
GTCTGTCGGCGCCATCCTGATGTCACTGTCCACGATCGTGGTGGCACTCAACGCCCAACTGCTCCGCCGCCTCGACCTGA
CCCCCGAGGCCAGCACACGCGCCGTTCTCAACCGTTAG

Protein sequence :
MTDHDHHAVATSHGGAHSHHGDPGDRLADHQSGTGHAGHGGHAGHGADHVAQFRKLFWINLIIAVPVVAFSTMFAMLVGY
QVPDVPGARWIAPLLGTVMYVVGGRPFLTGALSEIRSRKPGMMLLIGLAITVAFVASWGASLGLLDHELEFWWELALLIV
IMLLGHWVEMRSLAQTTSALDSLAALLPDEAEKVDGDRTVTVSPADLHVGDLVIVRPGGSVPADGRIVDGRADMDESMIT
GESRPVSRGVGDSVTAGTVATDSGLRVEITATGDDTALAGIQRLVTEAQNSSSRAQRLADRAAGWLFWFALVTAAVTAIA
WAIIGDPDTAVVRAITVLVIACPHALGLAIPLVVSIATERAARGGVLIKDRLALEAMRTVDAVLFDKTGTLTKGEPTVTA
IEATGDLDGDAVLALAAAAETDSEHPLARAIVRAAQDRGLTVPAATGFSSSPAVGVTATVEGRGIRVGGPRLLEEINAPE
VGAAAAWREEGAIILHVVGDGVVLGGLRLADEVRPESRDAVDALHKLGVEVVMITGDAEAVANAVGAELGIDRVFAGVRP
EDKASKVSALQQEGKKVAMVGDGVNDAPALAQADVGIAIGAGTDVAIASAGVILASSDPRSVLSVIELSRASYRKMKQNL
WWGAGYNLISVPLAAGVLAPIGFVLPMSVGAILMSLSTIVVALNAQLLRRLDLTPEASTRAVLNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-81 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_5752 YP_006442708.1 copper/silver-translocating P-type ATPase BAC0629 Protein 8e-113 47
Mycch_5752 YP_006442708.1 copper/silver-translocating P-type ATPase BAC0079 Protein 6e-114 43
Mycch_5752 YP_006442708.1 copper/silver-translocating P-type ATPase BAC0101 Protein 4e-76 43
Mycch_5752 YP_006442708.1 copper/silver-translocating P-type ATPase BAC0383 Protein 2e-99 42