Gene Information

Name : Mycch_5642 (Mycch_5642)
Accession : YP_006442604.1
Strain :
Genome accession: NC_018022
Putative virulence/resistance : Resistance
Product : Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 320388 - 321029 bp
Length : 642 bp
Strand : -
Note : PFAM: Helix-turn-helix domain of alkylmercury lyase; Alkylmercury lyase

DNA sequence : 
ATGACGAATGACCTGGACACCGTGGTGTCCACTATGGATAGTGTCTTCTCCCGCCAGGACAGCCCGGCCGGATGGCTATG
GCAGCCGCTGTTGCGGCAACTGGCCCGCGGCGAACCCCTCACGATTGCCGACCTCGCGGCCGCCACCGGCCGCGCCGGTG
ACGAGGTTGCGCAGGCGGTGGGCCGACTGCGCGACACCGAATACGACGACGCCGGACGGATCGTCGGCTACGGCATCACG
CTGCGCCCGACCCCGCACCGTTTCACCGTCGACGGCCACCAGCTCTACACCTGGTGTGCCCTGGACACCCTCATCTTCCC
CGCCACCCTCGGCCAATCCGCCCAGGTTGAATCCCCCTGCCACAGCACCGGTGCCCCGATACGGCTCACCGTCGAGCCCG
ACCGAGTCAGGGATGTCGAGCCCCAGACCGCGATGGTCTCCATCGTCACGCCTGACGACTTGGTCTCCGTACGGGCTTCC
TTCTGCAACCACGTGCACTTCTTCGCCGACGCCGACGCCGCGGCGCCCTGGCTCGCTGAGCACCCCGGCGGATCGGTCCT
CCCAGTCGCCGACGCTTATCAACTCGGCCGGCAGCTGGACGCCGCTCAATCCGAGGAGCCCGAGCCCGGCGGGTGCTGCT
GA

Protein sequence : 
MTNDLDTVVSTMDSVFSRQDSPAGWLWQPLLRQLARGEPLTIADLAAATGRAGDEVAQAVGRLRDTEYDDAGRIVGYGIT
LRPTPHRFTVDGHQLYTWCALDTLIFPATLGQSAQVESPCHSTGAPIRLTVEPDRVRDVEPQTAMVSIVTPDDLVSVRAS
FCNHVHFFADADAAAPWLAEHPGGSVLPVADAYQLGRQLDAAQSEEPEPGGCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0086 NP_763641.1 alkylmercury lyase Not tested SCCpbp4 Protein 1e-55 53
merB BAB47641.1 organomercurial lyase Not tested Type-III SCCmec Protein 2e-55 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_5642 YP_006442604.1 Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase BAC0654 Protein 8e-55 53
Mycch_5642 YP_006442604.1 Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase BAC0663 Protein 2e-53 53
Mycch_5642 YP_006442604.1 Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase BAC0658 Protein 8e-56 53
Mycch_5642 YP_006442604.1 Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase BAC0657 Protein 1e-36 51
Mycch_5642 YP_006442604.1 Alkylmercury lyase/Helix-turn-helix domain of alkylmercury lyase BAC0659 Protein 6e-35 45