Gene Information

Name : Mycch_5434 (Mycch_5434)
Accession : YP_006442432.1
Strain :
Genome accession: NC_018022
Putative virulence/resistance : Unknown
Product : DNA replication protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 95077 - 95934 bp
Length : 858 bp
Strand : +
Note : PFAM: IstB-like ATP binding protein

DNA sequence :
ATGACCCCCACCCCACGCACCCCGAAGACCACCGCCACAACCACCGCCGAGGAGGCACCGTCGGCAGCCGCAAGCCGCTA
TCAACAGCTGCGCTCGCATCTGGCCGAGCTCAAACTGGCTGCCGCCGCCGAAGCCTTACCCGCCGTCTTGGACCAAGCCA
GCGCCGAAGGAGTCTCGCTCACCGTCGCCTTGGAGCGACTGCTGGCCGTCGAAGTCGAGGCCAGCACCGCGCGCCGCCTG
GCGGGCCGGCTGCGGTTCGCCTGCCTGCCCACCCCGGCTACCCTCGCAGATTTCGATGTCGATGCCGCCGCCGGGATCGA
CCGCAAGCTCATCGATGAGTTGGGCACCTGTCGCTACCTGGAATCGGCGACCAACATCTTGCTCATCGGCCCACCGGGCA
CGGGCAAGACACACCTCTCGGTGGGATTGGCCAGAGCCGCCGCGCACGCCGGCTACCGGACCTACTTCACCACCGCCGCC
GATCTGGCCGCCCGCTGCCACCGCGCCGCGATCGAAGGACGCTGGGCCACCACCATGCGCTTCTACGCCGGCCCAACACT
GCTGGTGATCGACGAACTGGGCTACCTACCGCTACCGGCCGAGGCCGCATCGGCACTGTTTCAGGTTGTCTCCCAACGAT
ATTTGAAGACCAGCATCGTCATCACCACCAACCGCGGGGTGGGTGCTTGGGGCGACATCCTCGGCGACACCACCGTCGCC
GCCGCCATGCTCGACCGCCTGCTGCACCGCTCCGTGGTCATCAACCTCGACGGCGAGTCCTACCGCCTACGCGACCACCA
AGCAGCCGCCGAAACCCTGCGCCGAACCACCACCGGCAACCGCCAACAACTACACTGA

Protein sequence :
MTPTPRTPKTTATTTAEEAPSAAASRYQQLRSHLAELKLAAAAEALPAVLDQASAEGVSLTVALERLLAVEVEASTARRL
AGRLRFACLPTPATLADFDVDAAAGIDRKLIDELGTCRYLESATNILLIGPPGTGKTHLSVGLARAAAHAGYRTYFTTAA
DLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPAEAASALFQVVSQRYLKTSIVITTNRGVGAWGDILGDTTVA
AAMLDRLLHRSVVINLDGESYRLRDHQAAAETLRRTTTGNRQQLH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-30 42
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-30 42
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-30 42
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-30 42
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-30 42
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-30 42
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-30 42
unnamed CAA21402.1 - Not tested HPI Protein 2e-30 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-30 42
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-30 42
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-30 42
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mycch_5434 YP_006442432.1 DNA replication protein VFG1515 Protein 7e-31 42
Mycch_5434 YP_006442432.1 DNA replication protein VFG1627 Protein 7e-31 42
Mycch_5434 YP_006442432.1 DNA replication protein VFG1606 Protein 7e-31 42
Mycch_5434 YP_006442432.1 DNA replication protein VFG1663 Protein 1e-30 42