Gene Information

Name : Turpa_0827 (Turpa_0827)
Accession : YP_006438984.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 847044 - 847478 bp
Length : 435 bp
Strand : -
Note : PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: psn:Pedsa_0583 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatas

DNA sequence : 
ATGAAGAAGATTCTTGTTTTGTGCACCGGCAATAGCTGCCGCAGCCAGATCGCGCATGGGTACCTCGAGCACTTCGCGAA
GGGTAAAGCTGAAATTTACAGCGCGGGCGTCGAGACGCACGGCGTGAACCCGCGCGCGATCGCGACGATGAAGGCCGACG
GCATTGACATCTCGCACCACACCTCGAACAATGTGAATGAATACATGGGTTCGACAGGCTCACCACAGGCTTTCGATTTT
GATCTCATCATCACGGTGTGCGATAATGCGAAAGAGCGCTGCCCTGTTTTCCCCTCGAAGGCGCAGAAGTTCCACCACAA
CTTTCCCGACCCGGCAAAGGCGACAGGCACCGAAGAGCAGATCACCGCAGAATTCGCGCGCGTGCGGCAGATGATCAAAG
AATATTGCGAAAACTTCGTGAAGCAGAATCTCTAA

Protein sequence : 
MKKILVLCTGNSCRSQIAHGYLEHFAKGKAEIYSAGVETHGVNPRAIATMKADGIDISHHTSNNVNEYMGSTGSPQAFDF
DLIITVCDNAKERCPVFPSKAQKFHHNFPDPAKATGTEEQITAEFARVRQMIKEYCENFVKQNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 8e-19 43
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-20 42
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 5e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_0827 YP_006438984.1 protein tyrosine phosphatase BAC0580 Protein 4e-20 44
Turpa_0827 YP_006438984.1 protein tyrosine phosphatase BAC0032 Protein 1e-19 44
Turpa_0827 YP_006438984.1 protein tyrosine phosphatase BAC0581 Protein 4e-22 44