Gene Information

Name : Turpa_0826 (Turpa_0826)
Accession : YP_006438983.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Resistance
Product : arsenical-resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 846003 - 847043 bp
Length : 1041 bp
Strand : -
Note : PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657:IPR004706; KEGG: sli:Slin_3940 arsenic resistance protein; PFAM: Bile acid:sodium symporter; S

DNA sequence :
ATGACAGGCAAGCGACTTTCTTTTCTCGACCGCTACCTCACGCTGTGGATTTTCCTCGCGATGGGTATCGGCGTCGGTAT
CGGTTACTTTTTCCCCGATGCTCCCAAAGCGCTGGGAGCTTTCCAGAGCGGTTCGACAAACTACCTGATTGCAGCGGGCC
TCATTCTCATGATGTACCCACCGCTTGCAAAAGTAAAGACAGACAAATTATCTGAGGTATTCCGGAACCGCAAGGTGCTC
GCGCTCTCGCTGGTGCAGAACTGGTTGATGGGGCCGATACTCATGTTCGCGCTCGCGGTCATATTTTTGCCCGACAAACC
CGAATACATGACGGGGCTGATCCTCATTGGCATTGCCCGTTGCATTGCGATGGTGATTGTGTGGAACGATCTCGCGCGCG
GCGACAACGAATACGTTGCGGGCCTCGTTGCCTTCAACAGCGTCTTCCAGATTCTTTTCTACAGCGTCTATGCGTATGTG
TTCGTGACCGTACTGCCGCCGCTCTTTGGCCTCAAGGCAGCCTCTGTCGACATCACCATGCGACAAATTGCGGAGAGCGT
GCTCATCTACCTCGGCATTCCATTTGCGGCCGGCGTCGCAAGCCGCAAGGTTTTGATTCGCCTCAAGGGTAAAGAATGGT
TTGAACAGGTATACCTGCCGAAGGTAAGCCCGGTAACACTCGTGGCACTGCTTTTCACGATCGTCGTCATGTTCAGCTAT
AAGGGCGAACTGATTGTACGCATTCCGGCGGATGTACTGCGTATCGCGCTGCCGCTCCTCATCTATTTCGGTATCATGTT
CTTCAGCGCATTTTTCCTCGCCCGCCGTGCAGAGGTGGACTATGAAAAATCAGTCTCGCTTGCGTTCACGGCGGCCGGCA
ACAATTTTGAACTCGGTATCGCGGTGGCGATCGCGGTCTTCGGTATAAACTCAGGTGCCGCGTTCGCCGCGGTGATCGGT
CCGCTGATCGAGGTACCGGCGCTGATTCTCCTGGTGGGTTTCGCGCTGCGCTACAAGAAGCGCTTGGAAGGGGCCGCATA
G

Protein sequence :
MTGKRLSFLDRYLTLWIFLAMGIGVGIGYFFPDAPKALGAFQSGSTNYLIAAGLILMMYPPLAKVKTDKLSEVFRNRKVL
ALSLVQNWLMGPILMFALAVIFLPDKPEYMTGLILIGIARCIAMVIVWNDLARGDNEYVAGLVAFNSVFQILFYSVYAYV
FVTVLPPLFGLKAASVDITMRQIAESVLIYLGIPFAAGVASRKVLIRLKGKEWFEQVYLPKVSPVTLVALLFTIVVMFSY
KGELIVRIPADVLRIALPLLIYFGIMFFSAFFLARRAEVDYEKSVSLAFTAAGNNFELGIAVAIAVFGINSGAAFAAVIG
PLIEVPALILLVGFALRYKKRLEGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB AFC76433.1 ArsB Not tested AbaR5 Protein 3e-101 60
arsB CAJ77016.1 transmembrane protein of arsenate pump Not tested AbaR1 Protein 2e-101 60
arsB ADZ05767.1 arsenic resistance protein Not tested AbaR11 Protein 3e-78 59

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_0826 YP_006438983.1 arsenical-resistance protein BAC0573 Protein 2e-111 64
Turpa_0826 YP_006438983.1 arsenical-resistance protein BAC0004 Protein 1e-84 53