|
Name : Turpa_0607 (Turpa_0607) Accession : YP_006438765.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Unknown Product : SsrA-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 613777 - 614220 bp Length : 444 bp Strand : + Note : PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: tye:THEYE_A1193 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-bind DNA sequence : ATGGAAATTGCCGTCAATCGTAAGGCTCGCTTCAACTACGAAATTGTCGAAGATTTCGAGGCCGGCATTGCGCTCACGGG AACCGAAGTCAAATCGCTGCGCCAGAAAAAGGTGAATATTTCAGATGGTTATGTGCTGTTGCGCGGGCCTCTGGTGCAGC TGATCAACTGCCGCATCGAACCCTATGAAAAGGGCAATATCATGAACCATGATCCGCTGCGGCCCCGCAACCTGCTGCTG AAGCAGAAAGAGATCGACCGCATGCGCGGCAAGATGCACGAACGTGGTTATGCTTTGCTGCCCCTCAAAATGTACTTTAA GGGCCGTTATGTGAAAGTGCTGATCGGGCTCGGCAAAGGTAAAAAGTCGCATGATAAGCGTTCATCGATTCGTGAAAAAG ACATTCGCCGCGACACCGAGCGCGAGATGAAAGATTACAAATAG Protein sequence : MEIAVNRKARFNYEIVEDFEAGIALTGTEVKSLRQKKVNISDGYVLLRGPLVQLINCRIEPYEKGNIMNHDPLRPRNLLL KQKEIDRMRGKMHERGYALLPLKMYFKGRYVKVLIGLGKGKKSHDKRSSIREKDIRRDTEREMKDYK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AET14351.1 | SsrA-binding protein | Not tested | SaPI68111 | Protein | 5e-22 | 47 |
| smpB | NP_230495.1 | SsrA-binding protein | Not tested | VPI-1 | Protein | 6e-16 | 41 |
