Gene Information

Name : Turpa_0510 (Turpa_0510)
Accession : YP_006438670.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Virulence
Product : Aldehyde Dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 514490 - 516031 bp
Length : 1542 bp
Strand : -
Note : PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: scl:sce5007 putative aldehyde dehydrogenase (NAD(+)); PFAM: Aldehyde dehydrogenase; SPTR: Aldehyde Dehydrogenase

DNA sequence :
ATGGCTGCGAAAAAGAAAGCGAAAGCAAAGACCCCGGCGCCGGTAAAAAAGAAAACGGCAGTCGTCGCTGCGGCGAGCGC
CAAAACCGACATCATTCAATTTGGCAAAGCCTGGGAATACTCTGAAAGTATCGAGTCGGCAGCGATTGTCAAGATTGCCC
CGAAATACAATCTCTTCATCAACGGCAAATTCGTCGCTCCCAAAAGCGGTAAATATTTCGCCTCGATTAACCCGGCAACC
GAGCAAAAAATCGCCGACGTCGCCGAAGCGGGCGAGGCTGACGTCGATCTCGCCGTGAAGGCCGCGCGGCAGGCTTACAA
CAAAGTCTGGTCGAAGCTTCCCGGCAAAGAGCGCGCAAAATACATCTACCGCATTGCGCGGCTCATTCAAGACCATGCGC
GCGAACTGGCGGTGCTCGAGTCGATCGACGGCGGCAAGCCGATTCGTGAATCGCGCGACGTCGATGTGCCGCTCGCGGCT
GCGCACTTTTTCTATTATGCGGGTTGGGCCGATAAACTGGACTATGCGTTTCCCGGCCGCACACTGAAGCCTCTCGGTGT
CGCGGGGCAGGTGATACCCTGGAACTTTCCATTGCTGATGGCCGCTTGGAAACTCGCACCAGCGCTTGCGTGCGGCAATA
CGGTTGTGCTGAAACCGGCTGAAACGACGCCGCTCACCTCGCTTTTTCTCGCGCAGATTCTGCAAGAGGCAGAACTGCCA
GACGGTGTGGTCAACATCGTCACCGGCGCCGGCGCAACCGGGGCATCGGTGGTGTCGCACGCCGACGTGAACAAAGTGGC
TTTCACGGGCTCAACTCTTGTTGGCAAAAAAATTCAGCAGGCCCTCGCAGGCTCGGGTAAAAAAATGACACTCGAGCTCG
GTGGCAAAGCGGCAAACATCATCTTTGAAGACGCTGCGATCGATCAGGCGGTCGAAGGTATCGTCAATGGTATCTACTTT
AACCAGGGCCATGTGTGCTGTGCGGGTTCAAGGCTGCTCGTGCAAGAGTCGATTCATGACGTTGTTGTGAAGAAGCTTTT
CCGTCGCCTGCAGACTCTGCGCGTGGGAAATCCGCTCGACAAAAATACCGACATTGGCGCGATCAATTCAAAAATGCAGC
TCAACAAAATCTGTGAGCTCGCCGACTCGGGCGTCGCAGAGGGCGCAGTGATGCACCAGAAGGCTGGCAAGCTGCCCGAC
AAAGGTTTCTGGTTTCAGCCTACGTTTTTCACCAACGTGACCTCGTCGAGCCGCATCGCGCGCGAAGAAATTTTCGGGCC
GGTGCTTTCGGTCATGACGTTCAGAACTCCCGACGAAGCAGTTGAAAAAGCCAACAACACGCCTTACGGCCTTTCGGCCG
GCATCTGGACAGACAAGGGCTCAAAGGCGATGAAGATGGCAAATGCGCTGCGCGCAGGTGTCGTGTGGATTAACACGTTC
AACAAATTTGACCCGACATCGCCCTTCGGCGGTTATAAAGAATCGGGTTACGGCCGCGAAGGCGGCAAACAGGGCCTGCT
CGACTATTGTAAGATAGAATAG

Protein sequence :
MAAKKKAKAKTPAPVKKKTAVVAAASAKTDIIQFGKAWEYSESIESAAIVKIAPKYNLFINGKFVAPKSGKYFASINPAT
EQKIADVAEAGEADVDLAVKAARQAYNKVWSKLPGKERAKYIYRIARLIQDHARELAVLESIDGGKPIRESRDVDVPLAA
AHFFYYAGWADKLDYAFPGRTLKPLGVAGQVIPWNFPLLMAAWKLAPALACGNTVVLKPAETTPLTSLFLAQILQEAELP
DGVVNIVTGAGATGASVVSHADVNKVAFTGSTLVGKKIQQALAGSGKKMTLELGGKAANIIFEDAAIDQAVEGIVNGIYF
NQGHVCCAGSRLLVQESIHDVVVKKLFRRLQTLRVGNPLDKNTDIGAINSKMQLNKICELADSGVAEGAVMHQKAGKLPD
KGFWFQPTFFTNVTSSSRIAREEIFGPVLSVMTFRTPDEAVEKANNTPYGLSAGIWTDKGSKAMKMANALRAGVVWINTF
NKFDPTSPFGGYKESGYGREGGKQGLLDYCKIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-65 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-69 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-71 41
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-67 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-71 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_0510 YP_006438670.1 Aldehyde Dehydrogenase VFG0082 Protein 2e-69 42