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Name : Turpa_0505 (Turpa_0505) Accession : YP_006438665.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 509942 - 511201 bp Length : 1260 bp Strand : - Note : PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR002317:IPR015866:IPR002314; KEGG: lbf:LBF_3352 seryl-tRNA synthetase; DNA sequence : ATGATTGATCACCAGCTGCTGAAAACCGACGAAGGCTTTGAGCGTGTGCTGCAGAGTCTCGCGAAGCGCGGTGACACGGC TTCGGCCGCAGACCTGAAAGAAGCGGCCGAAAAGCGCAGATTAATGATTCGCGAGGTTGAGGCGCTCTCGAATGAGCGCA ATGTGCAGTCGAAGAAACTCGGCGAGCTCAAGGCGCAGGGAAAGCAGGCCGAGTTCGATGCGTTGCGCGAAACGATGAAA GACGTGGCCGACCGCCTCAAGGCACTCAAAGAAGAAGAGGCGCCGATAGAAGAGAGGTTTCAGAACCTGCTGGCGCGCCT GCCGAACATTCTCGATGAAAAAGTGCCCGCAGGCAAAGATGAAACTGAAAATGTCGTCGTGCGCACGGTGGGTGAGATAC CCCAATTTGATTTTGAGGTAAAGCCCCACTATGAAATTGCAGAATCGCAATCACTGGTCGATTTCGAGCGTGGCGTTAAG ATTTCGGGTGCGCGCTTCTATGTCTACAACGAGCAGATCGCGCGGCTCGAACGCCAACTTGCCAACCTCATGCTCGACCT GCACGCTGAGGCGGGCTACAAAGAGCGCATGGTGCCGCTTTTGGTGAAAGACGAGTGCATGTTCGGCACTGGGCAGTTTC CCAAATTCAATGATGAATATTACCGCATGGAGAAAGACGGCCTCTCGCTGATACCCACGGGCGAAGTGCCGCTGACGAAC CTTTACGCCGACGAAATTCTGAATGCGGCCGAATTGCCCATTAAACTCACTGCATTCACGCCCTGCTTTCGCCGCGAGGC GGGCAGCGCAGGTAAAGACACACGGGGGCTCGTGCGTGTACACCAGTTCAACAAGGTTGAGCTCGTGAAATTCGTCAGAC CTGAAGAATCAGAAAAAGAGTGGATTTCTCTCACACACGATGCCGAACGCGTGCTGCAAAAATTGGGCCTTACCTACCGC GTGCTGAGTCTGTGTTCGGGCGACATGGGCTTCACCTCTTCGATTACCTATGACCTCGAAATCTATATGCCGGGCCTCAA ACGCTGGCTCGAGATTTCTTCATGCTCAAACTTCAAAGACTTTCAGGCACGGCGCGCAAAAATACGTTACAAGAACGAAG CGGGCAAAAACGAATACGTGCACACGATCAATGGCTCGGGCGTCGCAGCGGGCAGACTCGTCGCAGCACTCTTGGAATAC CACCAGACACCGTTCGGCAAAGTGGATTGGCGGGCGATTGAGGCGAAGCTGAAAAGCTGA Protein sequence : MIDHQLLKTDEGFERVLQSLAKRGDTASAADLKEAAEKRRLMIREVEALSNERNVQSKKLGELKAQGKQAEFDALRETMK DVADRLKALKEEEAPIEERFQNLLARLPNILDEKVPAGKDETENVVVRTVGEIPQFDFEVKPHYEIAESQSLVDFERGVK ISGARFYVYNEQIARLERQLANLMLDLHAEAGYKERMVPLLVKDECMFGTGQFPKFNDEYYRMEKDGLSLIPTGEVPLTN LYADEILNAAELPIKLTAFTPCFRREAGSAGKDTRGLVRVHQFNKVELVKFVRPEESEKEWISLTHDAERVLQKLGLTYR VLSLCSGDMGFTSSITYDLEIYMPGLKRWLEISSCSNFKDFQARRAKIRYKNEAGKNEYVHTINGSGVAAGRLVAALLEY HQTPFGKVDWRAIEAKLKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-80 | 49 |
