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Name : Turpa_4122 (Turpa_4122) Accession : YP_006442261.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : - COG ID : - EC number : - Position : 4336093 - 4337790 bp Length : 1698 bp Strand : + Note : PFAM: GSPII_E N-terminal domain; Type II/IV secretion system protein; TIGRFAM: general secretory pathway protein E; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR013369:IPR003593:IPR007831:IPR00148 DNA sequence : ATGCGACGATTCGGCGACATTCTGGTCGAAGAGGGTTTGATCGAAGAAGATGAGCTGAAAAAAGCTCTGACGCTGCAGCG TAAATCTGCCTACAAACTCGGGCAGATTCTCATCAAAAAAGGCCTGATCTCTGAAGAAGACGCGCTCAAAGCGCTCTCGA AACAGTATGAAATGGAGTTCGCTGAAAAGCTTGAACCCAAAAATATCGAGCAACTGACCGACAAGGTGCCGCTGAAGTTC GTTCAGAAATACCGTGTGGTGCCCTATTTCATCGAAGATCGCGAGATTCGTATTGCGATGACCGACCCTTCGATTCTGCA TCCGCTCGATGAATTCAGGCTGCTCTTTTTGGGTTACGACGTTAAACCCGTGCTGACGCGCGAAAGCGAAATTTTGCGTG TTATACATAACGTCTACGAAGCGAAGAGCCGCGCCGAAGACACCGACCTCGGCATGAGCGACGGACTCGAGCTGCTCGAC GACATTCAAGACCTGCACGATTCTACAGAACTCGCCAACCAGGCGCCGATCATCAAGCTCGTGAATATGATTTTGTCGAA TGCGGTCAACGAAAAGGCATCGGATATTCACTTCGAACCGCAGGAAAAAGACTTCATCATTCGTTTTCGTATCGACGGCA TTCTGCATAAGATGATGGCACCGCCGAAGTCGGTACAGAACGGCGTGATTTCGCGCGTGAAGATCATGGCGAACCTCAAC ATCGCCGAGAACCGTCTGCCGCAAGATGGTCGCATTCGCCTGCGCTTCAGCGGCAACGACATCGACATACGCGTTTCGTC GCTGCCGACACAGCACGGCGAACGCCTCGTATTGCGCCTTCTGAACCGTACTGCTTCGAAATACGAGCTCGCATCGATCG GCTTTGAAAAAGATACCTATGACCTCTTCGTCGAAACGATCAACCAGCCGAACGGCATTGTACTGATTACCGGCCCCACG GGTTCGGGTAAAACGACAACCCTGTACGCTGCGCTGACCCGTCTCAACAGCAGCGAACGCAACATCATCACGGTCGAAGA CCCGATCGAATACCAGATCGACGGTATTGGCCAGGTTCAGGCGCGCCCGAAGATTGGTTTTACATTCGCAGAAGGATTAA GATCGATTCTGCGCCAAGACCCTGACGTGATCATGGTCGGCGAGATTCGTGACGAAGAGACCGCGCGTATTGCGATTCAG TCATCACTCACGGGTCACCTTGTGTTTTCAACGCTGCACACCAATGACGCTCCGTCTGCGGTCACTCGACTCATCGACAT GGGTATCGAGCCATTTCTGGTTACTTCAACCTGCCGCGGCATTATGGCGCAGCGCCTCGTGCGCCGGCTGTGCACGCACT GCAAAAAGCCCAAGACCGTCAATGTCAAAGACCTGACGTCGCTCGGCCTCAGTTATATCTCTAACAAGAAAAAGGCCACT GCCCCGACAGGCAAGGTCAAGATTTTTGAACCCAATGGCTGCAAAGAGTGCATGAACACAGGGTACCGCGGCCGAATGGG CGTTTATGAATTTATGCCGCTGACGGCCAAATTGCGCGAACTCGTGCTCGCGCGCGTGTCTCTTGACGAGCTGAAAGACG AAGCTATACGCGAAGGTATGGTCACGCTGCGCAATGCCGCCCTGCGCCAGGTAATTCTCGGTATCACGTCGCTCGATGAG GCGATGCGCATTACGTAA Protein sequence : MRRFGDILVEEGLIEEDELKKALTLQRKSAYKLGQILIKKGLISEEDALKALSKQYEMEFAEKLEPKNIEQLTDKVPLKF VQKYRVVPYFIEDREIRIAMTDPSILHPLDEFRLLFLGYDVKPVLTRESEILRVIHNVYEAKSRAEDTDLGMSDGLELLD DIQDLHDSTELANQAPIIKLVNMILSNAVNEKASDIHFEPQEKDFIIRFRIDGILHKMMAPPKSVQNGVISRVKIMANLN IAENRLPQDGRIRLRFSGNDIDIRVSSLPTQHGERLVLRLLNRTASKYELASIGFEKDTYDLFVETINQPNGIVLITGPT GSGKTTTLYAALTRLNSSERNIITVEDPIEYQIDGIGQVQARPKIGFTFAEGLRSILRQDPDVIMVGEIRDEETARIAIQ SSLTGHLVFSTLHTNDAPSAVTRLIDMGIEPFLVTSTCRGIMAQRLVRRLCTHCKKPKTVNVKDLTSLGLSYISNKKKAT APTGKVKIFEPNGCKECMNTGYRGRMGVYEFMPLTAKLRELVLARVSLDELKDEAIREGMVTLRNAALRQVILGITSLDE AMRIT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-96 | 43 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-96 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Turpa_4122 | YP_006442261.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 9e-98 | 50 |
| Turpa_4122 | YP_006442261.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 9e-88 | 48 |
| Turpa_4122 | YP_006442261.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 2e-97 | 47 |
| Turpa_4122 | YP_006442261.1 | type II secretion system protein E (GspE) | VFG0233 | Protein | 6e-83 | 45 |
| Turpa_4122 | YP_006442261.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 3e-96 | 43 |
