Gene Information

Name : Turpa_3902 (Turpa_3902)
Accession : YP_006442042.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Unknown
Product : ammonium transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4076420 - 4077898 bp
Length : 1479 bp
Strand : +
Note : PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: ote:Oter_2476 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; TC 1.A.1

DNA sequence :
ATGAATCTCAGAACTCTAAGACTGGCATCGACGGCTTTTTGCCTCTCGCTGCTGGCACCCGCTGCAATCGCAGCGCAGGC
GAAACCCGCTGAAGCGGCAAAACCGCGCGAGCTGACAATAGAACAGCGCGTCGCAGATATCGAAGCTTACATGAACAACT
CAAAGCGCGTGGCCGACGACCCCGCGGTGAAAGCTGAAGACAAGGCAGCAAAGAGTAACGTGGCCGGCGCCGGGCCGGGA
CACAATGCATGGCTCATGACATCTGCCCTGCTGGTGCTCTTTATGACTTTACCCGGCCTTGCTCTTTTCTACGGCGGCCT
CGTTCGCAGCAAAAACATCCTGAGCGTTGTGGCGCAGTGCTTTGGCATTGCAGGCCTCGTCACCATCTTGTGGTGGCTGA
TCGGCTATTCGCTGGTATTTTCTGAGGGCAACGCGTTCATCGGTGGCGGCGCGTACGCCTTTTTCAAGGGCGTCGACAGC
ACCGTCGGCCAGGGCGGCCCCTGGATCTCGAACAACGTCTTTTCGATGTTTCAAATGATGTTCGCGATTATCACTCCTGC
GCTGATCGTGGGCGCGGTGGCCGAACGCATGAAATTTTCTGCAATCATGGCTTTCGTCGCCTTGTGGATGTTCGCCGTTT
ACTTTCCTCTCGCACACATGGTGTGGGGCCCCGCAGGTTACATGAACGGTCTCGGCAACGAGGCGGCGGCGATCAAAGCG
ATCGACTTCGCAGGCGGCACGGTCGTACACATGTCATCGGGTTGGTCGGCGCTCGTGCTCTGCCTTATTCTCGGCAAGCG
CACCGGCTTCGGAGCCAAGGCATTTACTCCGCACAGCCTCGTGATGACCGCGATCGGTACGGGCATGCTCTGGGTTGGCT
GGTATGGCTTTAACGCAGGTTCTGCGCTCGCGGCAGACGGCATCGCGGCGAATGCATTTACCACGACGACCCTTGCGGCT
GCAGTTGCTGCATTCGTGTGGCCGATGCTCGAATGGCTTGTGAAAGGTCACCCTACTGTGCTCGGCTTCTGCTCGGGCGC
GGTCTCGGGCCTTGTTGTTATCACTCCGGGTGCAGGTTTTGTCGACGCCAATGCTGCGGTTATTATGGGGCTTTTGGGCG
GCATAATACCCTTCTTTGCGGTAATGTATCTGAAGAACTGGCTCAAATATGACGATGCACTCGATACGTTCGGGGTGCAT
GGCGTTGGCGGCACACTCGGCGCCATTCTGACAGCATTTTTCGCGAGCAAAGACGTGAACGGCGCCCTGGCACCGCTGAT
TGAAAAGGGTCTGGTGTCTGCGCACATTCAGGCCATGCTGTTCACAATAGTACTTTCTGTTGTCGCCACCGTTGTCATCG
CATACCTCGTGAAATTGACGATTGGTCTTAAAGCGAGCGCAGAGAAAGAATCGCTCGGCCTTGATATCAGCGAACACGGC
GAAGAAGGCTACAGCGGCCTGCAGACCTTCATCGACTAA

Protein sequence :
MNLRTLRLASTAFCLSLLAPAAIAAQAKPAEAAKPRELTIEQRVADIEAYMNNSKRVADDPAVKAEDKAAKSNVAGAGPG
HNAWLMTSALLVLFMTLPGLALFYGGLVRSKNILSVVAQCFGIAGLVTILWWLIGYSLVFSEGNAFIGGGAYAFFKGVDS
TVGQGGPWISNNVFSMFQMMFAIITPALIVGAVAERMKFSAIMAFVALWMFAVYFPLAHMVWGPAGYMNGLGNEAAAIKA
IDFAGGTVVHMSSGWSALVLCLILGKRTGFGAKAFTPHSLVMTAIGTGMLWVGWYGFNAGSALAADGIAANAFTTTTLAA
AVAAFVWPMLEWLVKGHPTVLGFCSGAVSGLVVITPGAGFVDANAAVIMGLLGGIIPFFAVMYLKNWLKYDDALDTFGVH
GVGGTLGAILTAFFASKDVNGALAPLIEKGLVSAHIQAMLFTIVLSVVATVVIAYLVKLTIGLKASAEKESLGLDISEHG
EEGYSGLQTFID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00287 YP_008207752.1 Ammonia permease Not tested AbaR25 Protein 1e-71 47
BJAB0868_00291 YP_008211617.1 Ammonia permease Not tested AbaR26 Protein 1e-71 47