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Name : Turpa_3818 (Turpa_3818) Accession : YP_006441958.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Unknown Product : hydroxymethylpyrimidine synthase Function : - COG functional category : - COG ID : - EC number : - Position : 3981560 - 3983059 bp Length : 1500 bp Strand : - Note : PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: hoh:Hoch_5222 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynt DNA sequence : ATGGAAATTCCCTGCCGACCTGTTAAACTCTCCAATGGAGACATAATACGGCTCTATGAAACTGCCGGCCCGCAGGGTTA TGCCGCCGCGCAGGGCATTCCGAAGCGGCGTGAGAAGTGGGTCGCGGCGCGGCGGGCGGCGGGTGATAGATCCCCCACGC AGATGTACTATGCCAAAAAGGGCATTGTTACAGAAGAGATGCAATTTGTCGCGATGCGTGAAAATATGGCAGTTGATTTT GTCATGAGCGAGGTGGCGCGCGGGCGCGCGATTATACCGGCGAACATTAACCATACAGAGCTTGAGCCGATGATTATCGG GCGCAACTTTCTGGTGAAGATCAACGCGAACATTGGCAATTCGGCGCTCGCCTCGTCGATCGACGAAGAGGTCGAAAAGC TGCGCTGGGCAACTAGATGGGGCGCCGACACGGTAATGGATCTTTCGACGGGCAAGAACATTCACCAGACGCGCGAGCAC ATTCTGCGCAATTCTCCCGTGCCGATTGGTACTGTGCCGATTTACCAGGCGCTTGAAAAGGTCAAAGGCAAGGCCGAAGA TCTGAACATTGATATTTTTCTGGAGACACTGGTCGAGCAGGCAGAGCAGGGTGTGGATTATTTCACCATACACGCCGGCG TGCTGCTTAAATATATTCCGCTGACGGCGAAACGTGTCACGGGTATCGTTTCTCGCGGCGGCTCGATCATGGCGAAATGG TGCCTGGCGCACCACAAAGAAAATTTTCTCTATACGCATTTCAATGAAATCTGCGAAGTCATGAAAAAGTACGACGTGTC GTTTTCGCTGGGCGATGGGCTGCGGCCCGGGTCAACGGCTGACGCGAATGACGAGGCACAGTTTGGCGAGCTGCGCACAT TGGGCGAACTCACCAAAGTCGCCTGGAGCCACGATGTGCAGACCATGATCGAGGGGCCGGGGCATGTGCCGATGCACCAG ATCAAAGAAAACATGGACCTGCAGCTCGAGATCTGCCACGAAGCACCGTTCTATACCCTGGGGCCACTCGTCACCGATAT CGCGCCGGGGTATGACCACATCACTTCGGCGATTGGCGCGGCGATGATTGGTTGGTTTGGCACGGCGATGCTCTGTTACG TGACGCCCAAAGAGCATTTGGGGCTGCCCGATAAAGACGACGTCAAGACGGGCGTCATCACCTATAAAATCGCCGCGCAC GCTGCTGATTTAGCAAAGAACCATCCCGGCGCACGTGATCGCGACGACGCGCTCTCAAAGGCAAGGTTTGAATTTCGCTG GGAAGACCAGTTCGATCTCTCGCTCGACCCTGAAACGGCGCGCAAATACCACGACCAGACGTTGCCGCAAGACGGCATGA AGAAAGCCCACTTTTGTTCCATGTGCGGCCCGCACTTCTGTTCGATGAAGATCACGCAAGATGTGCGCGAGTTGGCTGAG CAGGGTATGGCAGAAAAATCACAGGAGTTCAAGGAAAAAGGCAGCGAGATCTACGTCTGA Protein sequence : MEIPCRPVKLSNGDIIRLYETAGPQGYAAAQGIPKRREKWVAARRAAGDRSPTQMYYAKKGIVTEEMQFVAMRENMAVDF VMSEVARGRAIIPANINHTELEPMIIGRNFLVKINANIGNSALASSIDEEVEKLRWATRWGADTVMDLSTGKNIHQTREH ILRNSPVPIGTVPIYQALEKVKGKAEDLNIDIFLETLVEQAEQGVDYFTIHAGVLLKYIPLTAKRVTGIVSRGGSIMAKW CLAHHKENFLYTHFNEICEVMKKYDVSFSLGDGLRPGSTADANDEAQFGELRTLGELTKVAWSHDVQTMIEGPGHVPMHQ IKENMDLQLEICHEAPFYTLGPLVTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPDKDDVKTGVITYKIAAH AADLAKNHPGARDRDDALSKARFEFRWEDQFDLSLDPETARKYHDQTLPQDGMKKAHFCSMCGPHFCSMKITQDVRELAE QGMAEKSQEFKEKGSEIYV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 2e-175 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 2e-175 | 73 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 4e-166 | 70 |
