Gene Information

Name : Turpa_3785 (Turpa_3785)
Accession : YP_006441925.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Unknown
Product : protein of unknown function UPF0001
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3950126 - 3950803 bp
Length : 678 bp
Strand : -
Note : PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: gsu:GSU2544 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: Putat

DNA sequence :
GTGAACCTGAACGAACGTTTCAATCAGGTTCTCGCCGAAATTGGCGAAGCCGCGATGGCCGCAGGCCGGCCGGCCGATTC
AGTCAACCTGATCGCCGTTTCGAAAACTCACCCCGTTTCGCTCGTCGATGAGCTCGCCCAGCTAGGTCAGGTGCACTTTG
CGGAAAACCGTATCGCCGAGCTGACTGAAAAGCAAGCCGCGGCGAGGGCCACCGGTCTGCAATGGCATCTCATCGGCCAA
CTGCAGACGAACAAGGTAAAGCTGCTAAACGCGGGGACAATTCTGCATTCACTCGACCGGCTCTCGCTTGCAGAGAAACT
GCAGCAGCAATTTGCTGCAGACAACATTCGCTGCCTCATTCAGGTCAACTGCAGTGGCGAACCTAACAAATCGGGTGTGG
CTCCGGCAGATTTCGACGCGCTCGCCGAAGCCATTGCGAAAAAGCCGGCGATCAGGGTTCTCGGGCTTATGACGATGGCA
GAACACAGCGATGACGAGCGGGTGGTGAGACGGGCATTTGCCGACCTTCGCGAACTTTCAGAGCGGCTTGCGGCGCAGAA
GATTTTTCCCGGCTACGAGAACTGGCTTTCGATGGGCATGTCAGGTGACTTTCGCTATGCAATCGCCGAAGGCGCAACGC
ATGTGCGTATAGGCACTGCGATTTTCGGGCATAGGTAA

Protein sequence :
MNLNERFNQVLAEIGEAAMAAGRPADSVNLIAVSKTHPVSLVDELAQLGQVHFAENRIAELTEKQAAARATGLQWHLIGQ
LQTNKVKLLNAGTILHSLDRLSLAEKLQQQFAADNIRCLIQVNCSGEPNKSGVAPADFDALAEAIAKKPAIRVLGLMTMA
EHSDDERVVRRAFADLRELSERLAAQKIFPGYENWLSMGMSGDFRYAIAEGATHVRIGTAIFGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-32 46
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-32 46
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-32 46
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-32 46