Gene Information

Name : Turpa_3773 (Turpa_3773)
Accession : YP_006441913.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3937284 - 3938024 bp
Length : 741 bp
Strand : -
Note : PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: lbl:LBL_2738

DNA sequence : 
ATGCGCGCTTTGGGCGTTATCCCTGCGCGCTATGCTTCGACGCGTTTTCCCGGTAAACCGCTAGCCCTGATCGCCGGCAA
GCCCATGATTGAATGGGTTTATGGCGCGGCGAAGAAGTGCACCGACCTCGATCACGTCGTCGTCGCAACCGACGATGCGC
GCATTGCCGATGCTGTCAGGCAGTTCGGTGGCGAAGCGGTCATGACGCGTGACGACCATGTCTCGGGTTTCGATCGCATC
GTTGAAGTGGCGTCAAAGTTCTCTGGTTTTACGCACTACGTCAATGTGCAGGGCGATGAACCTCTGCTGCCTGCTGCGAA
TATATCGGGCGCTGTGGCGCTCTTTCGGGAGCATGGTGAAGACTGCCATATCGCAACGACCGCTGTGCCTTTTTCAAACG
AGGCCGACGAGGCGAATGAAAACATGGTCAAGGTTGTGCTCGCGCACGATGCGCGCGCGCTCTATTTTTCACGCTCGCGC
ATTCCGTTCTATCGCAAAGATGTGAGGGCCTCGCTGCCGGCGCTCAAGCACCAGGGGCTCTATGCCTATTCGCGCGAGGC
ATTGCTGAAGCTGGCCAAGCTGCCGGTCGCTGCGCTCGAAGAGGCCGAAAGCCTCGAGCAGCTGCGCTTTCTTTATAACG
GCTTCAATATCTTTGTGCATATTGCCCGCGAAGATTCGCCGGGCGTCGATGTGCCCGAAGACATTAAGCGCGTCGAACAG
ATTCTGCAGCATGCCGTCTAA

Protein sequence : 
MRALGVIPARYASTRFPGKPLALIAGKPMIEWVYGAAKKCTDLDHVVVATDDARIADAVRQFGGEAVMTRDDHVSGFDRI
VEVASKFSGFTHYVNVQGDEPLLPAANISGAVALFREHGEDCHIATTAVPFSNEADEANENMVKVVLAHDARALYFSRSR
IPFYRKDVRASLPALKHQGLYAYSREALLKLAKLPVAALEEAESLEQLRFLYNGFNIFVHIAREDSPGVDVPEDIKRVEQ
ILQHAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 4e-31 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 3e-31 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-31 44