Gene Information

Name : Turpa_3730 (Turpa_3730)
Accession : YP_006441870.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Virulence
Product : sulfate ABC transporter, ATPase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3898376 - 3899386 bp
Length : 1011 bp
Strand : -
Note : PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein; COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterPro IPR005666:IPR003439:IPR003593; KEGG: gca:Galf_1923 sulfate ABC transporter, ATPase subunit;

DNA sequence :
ATGCAAATTCAGATAGAAAAACTTTCGAAGATCTTCAAGAACTTCAAGGCCCTCGATAACGTGACGCTCGAGGCAAACCA
CGGCGAGCTGCTCGCACTGCTCGGGCCGTCGGGCTGCGGCAAGACGACGCTGCTCAGAATTATCGCTGGGCTCGAATTTT
CCGAAGAAGGCGTCATTCGGTTCGACGGCAAAGACGTGCAGACTCTCACCGCGAAAGAACGCAACGTTGGGTTCGTTTTT
CAGCATTATGCGCTCTTCAAGCACATGACGATTTTCGATAATGTCGCGTTTGGTCTGAAGGTACGTAAGAAGAAAGACCG
GCCGTCAAAAGCCGAAATTCGCGAGCGGGTGCTGAAGCTTCTCGGGCTCGTGCAGCTCGCGAACCTTGAAGATCGCTATC
CGCACCAGTTGTCGGGCGGGCAGAGGCAGCGCGTTGCGCTCGCACGTGCTTTGGCGGTTGAGCCCAGGGTTCTGCTGCTC
GACGAACCCTTCGGTGCGCTCGATGCGCAGGTACGCAAAGAGCTGCGCCGCTGGCTGCGTAAGCTGCACGACGAGATTCA
TATCACGAGCATCTTCGTGACACACGATCAAGAAGAGGCGCTCGAAGTCGCCGACCGTGTCGTGATTCTGAATAAAGGGC
AGGTAGAGCAGGTGGGCACGCCTGACGAGGTCTACCGCAACCCGAAGACGCCTTTTGTTTACCAGTTCATGGGCAATGTG
AACCTCTTTCACGGCCGCATTGAAGGAGTGCAGGGCAAGGGATATGTGCGCCCGCATGAAATTGAGATCGATACGGCGCA
GAAGTTTCCAACCGATTTTGCGGCGGTCATTGAAGGTGTGCAACCGCTGGGGCCGTACACACGCGTGACGCTGATCGATG
CGAAGACGCAGCAGCTCGTTGAGGCCGAGATTCCCTATGAAACGGGCAAAGCGCTTGGGTTAAACCTCGGTCTGTCGGTT
TTTTACCGTATTCGAAACGTTCAGACTTTTGATGGGGATTTTGTAATCTAA

Protein sequence :
MQIQIEKLSKIFKNFKALDNVTLEANHGELLALLGPSGCGKTTLLRIIAGLEFSEEGVIRFDGKDVQTLTAKERNVGFVF
QHYALFKHMTIFDNVAFGLKVRKKKDRPSKAEIRERVLKLLGLVQLANLEDRYPHQLSGGQRQRVALARALAVEPRVLLL
DEPFGALDAQVRKELRRWLRKLHDEIHITSIFVTHDQEEALEVADRVVILNKGQVEQVGTPDEVYRNPKTPFVYQFMGNV
NLFHGRIEGVQGKGYVRPHEIEIDTAQKFPTDFAAVIEGVQPLGPYTRVTLIDAKTQQLVEAEIPYETGKALGLNLGLSV
FYRIRNVQTFDGDFVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-26 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_3730 YP_006441870.1 sulfate ABC transporter, ATPase subunit VFG1206 Protein 7e-37 42