Gene Information

Name : Turpa_0350 (Turpa_0350)
Accession : YP_006438514.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Unknown
Product : Potassium-transporting ATPase B chain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 337187 - 339385 bp
Length : 2199 bp
Strand : -
Note : PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; COGs: COG2216 High-affinity K+ transport system ATPase chain B; HAMAP: Potassium-transporti

DNA sequence :
ATGGTTGCACGAATTCAAAAAAATAAAAAGGGCATTTTTACGGGCCAGGTAATCCAATCTGCCCTCTGGTCTGCGTTGAG
AAAATTTCATCCTGCCGTGCAGATGAAGAACCCTGTCATCTTTATGGTTACCGTTGGTGCGCTGTTCTGTACGGGCCTTT
TGCTGCGCGACATGCTTCAGGGCAGAAGCTCGGGCTTCACCGCACAGATTACCCTTTGGCTTTATTTCACGACATTTTTT
GCCAACTTCGCCGAGGCGATCGCCGAAGGGCGCGGTAAGGCGCGTGCCGACGCCCTGAGGCAGGCAAAGACGCACACCAT
GGCGCGTGTTTTGGTAAACGGCGCAGAACAGAAAATTCCGGCAGGTGAACTCACGCGAGGTATGGTTGTCGTCTGTGAGG
CGGGCGACCAGGTTCCAGGCGACGGTGAAGTTATCAGTGGTATCGCTTCAGTCGATGAGAGTGCGATTACCGGCGAGTCA
GCTCCCGTCATTCGTGAGTCAGGTGGCGACCGATCGGCTGTAACGGGCGGCACCAGAGTGATCAGCGACCGCATTGAGAT
ACGCATCACTGCCGAACCCGGGCACTCGTTTCTCGACAAAATGATATCGCTCATTGAGGGTGCAATAAGGGCGAAAACTC
CCAACGAAATTGCTCTGACGATTCTGCTCTCGATTCTTTCGATCGTCTTTTTGCTTGCGGTCGTGGCGATCTTGCCTTAC
GCGCGCTTTAGCGAGGCTCAAGGCGGCATTGCGGGTGCCAGCGAGGCAACGTCGATACCCTTGCTGATAGCGCTGCTCGT
GTGCCTCATACCAACGACGATTGGAGGTCTGCTTTCGGCGATCGGTATCAGTGGCATGGGCAGGCTCATGCGAGCCAATG
TGCTTGCGACATCGGGCAGGGCGATTGAGGCTGCCGGTGACATCGACGTTCTGTTGCTCGACAAGACCGGCACGATCACC
CTTGGCAATCGCATGGCGTCAGAGTTCATACCGGCCACGGGAGTCGATGTCTGGCGGTTGGCAGATGCGGCACAGCTTGC
ATCGCTCGCAGACGAAACCCCCGAGGGACGCTCGGTGGTTGTGCTCGCCAAAGAAAAATTTAACTTACGGGGACGCGAAC
TGCTCGCGCAGCACGGCAACTTTGTACCTTTTAGCGCCGTGACCCGTCTTAGCGGCATCGACATACCGATGACCGAGGCT
AACCCTGAGCGCATAATACGCAAAGGGGCAGCCGAAGCCGTGCGCGCCCTTGTGTTGTCGCGCGGCGGAGTATACCCTGT
CGAAATCGGGCGTACTGTCGAAGACATCTCGCGTCGGGGAGGCACTCCGCTGGTTGTTGCTGAAAACAAACAGGTTCTGG
GTGTCATTCATCTCAAAGATACAGTTAAACGCGGGCTGCAAGAGCGTTTTGCCGATCTGCGTAAGATGGGCATACGCACC
ATAATGATCACCGGTGACAATGCGCTGACGGCCGCCGCCATTGCTGCTGAGGCCGGCGTCGACGACTTTATTGCCCAGGC
GACACCCGAAGCAAAGCTTAGGCGTATTCGTGATGAGCAGGCAAAAGGCCATCTTGTTGCGATGATCGGTGACGGCACCA
ACGATGCTCCCGCTCTGGCGCAGGCAGACGTGGGTGTAGCGATGAACAGCGGCACGCAAGTGGCGCGTGAGGCCGGTAAC
ATGCTCGATCTCGATAGTAATCCCACTAAGCTCATCGAAATTGTCGAAATCGGCAAACAGCTTTTGATAACTCGCGGTGC
GCTGACGACGTTCAGCATTGCGAATGACGTTTCGAAATACTTCGCAATTTTGCCAGCGCTATTCGGTGGACTCTATGCTT
CGACGAAGTTTATCCCGAGCGGAGTCGAGGGGCTCAGCACGGGTGCTGCGACTTCGCTCTGGAAGCCAGAAACCGCAGAC
GGTCTCATCACCAGTACTTCGGCGGCAGGTCCGCTTGCGGCGCTCAACATCATGGGGCTGCAATCGCCAGAAAGCGCAAT
CTTGAGCGCAGTTATTTTTAATGCGCTGATCATCATCGCGCTTGTGCCGCTTGCGCTCAAAGGCGTGAAATACCGCGCCG
AGGGTGCCGATCGCGTGGTGCTCAAGAACCTTCTGGTTTATGGGCTCGGCGGCCTTATTACTCCGTTTCTCGGCATCAAG
CTGATCGATATGGCGATCACGGCGATGCATTGGGTTTGA

Protein sequence :
MVARIQKNKKGIFTGQVIQSALWSALRKFHPAVQMKNPVIFMVTVGALFCTGLLLRDMLQGRSSGFTAQITLWLYFTTFF
ANFAEAIAEGRGKARADALRQAKTHTMARVLVNGAEQKIPAGELTRGMVVVCEAGDQVPGDGEVISGIASVDESAITGES
APVIRESGGDRSAVTGGTRVISDRIEIRITAEPGHSFLDKMISLIEGAIRAKTPNEIALTILLSILSIVFLLAVVAILPY
ARFSEAQGGIAGASEATSIPLLIALLVCLIPTTIGGLLSAIGISGMGRLMRANVLATSGRAIEAAGDIDVLLLDKTGTIT
LGNRMASEFIPATGVDVWRLADAAQLASLADETPEGRSVVVLAKEKFNLRGRELLAQHGNFVPFSAVTRLSGIDIPMTEA
NPERIIRKGAAEAVRALVLSRGGVYPVEIGRTVEDISRRGGTPLVVAENKQVLGVIHLKDTVKRGLQERFADLRKMGIRT
IMITGDNALTAAAIAAEAGVDDFIAQATPEAKLRRIRDEQAKGHLVAMIGDGTNDAPALAQADVGVAMNSGTQVAREAGN
MLDLDSNPTKLIEIVEIGKQLLITRGALTTFSIANDVSKYFAILPALFGGLYASTKFIPSGVEGLSTGAATSLWKPETAD
GLITSTSAAGPLAALNIMGLQSPESAILSAVIFNALIIIALVPLALKGVKYRAEGADRVVLKNLLVYGLGGLITPFLGIK
LIDMAITAMHWV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 9e-145 58
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 1e-144 58
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 1e-118 56
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 3e-117 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-117 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-117 55
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-117 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 3e-117 55