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Name : Turpa_2677 (Turpa_2677) Accession : YP_006440822.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Unknown Product : type I site-specific deoxyribonuclease, HsdR family Function : - COG functional category : - COG ID : - EC number : - Position : 2757168 - 2760299 bp Length : 3132 bp Strand : + Note : PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; COGs: COG0610 Type I site-specific restriction-mod DNA sequence : ATGCCGACCGCAAAAGTCAACGAAGATCTGCTCGAACAAGCAGCGCTGCAATGGTTCAAGGAGCAGGGTTATACTCATAT TCACGGTTCCACCATCGCCCCCGGCGAACCGGCAGCCGAGCGTGAATCATTTGAAGAAGTCGTTCTTTCAGGCAGAATAC GCGATGCTCTTGCGCGAATCAATCCGACGCTTTCCACTGAAGTCATCGATGAAGCGCACAAGCAGCTCATGCGTATGGAT GCCCCGACCTGCCTTATCAACAACCGAACCTTTCACCGCTACGTTACCGACGGCATCAGCGTGTCCTATTCCAAGAACGG TGATGAGCGCGTAGAGCCGGTCAAGATCATAGACTTCGAGAAGCCAGAGAACAACGACTGGCTGGTGGTGAACCAGTTCG CGATCATTGCCAAGCCGTACCATCGGCGGCCGGACATCATTGTTTTTCTAAATGGTTTGCCGTTGGTAGTGTTTGAGCTA AAAAACATGGTTGGGGCACCAACAGTTGCGGATGCTTACAGACAATTGCAAACGTACAAGGCCCAGATTCCAAAGTTGTT TAATTACAACGAACTAATGGTCGTTTCTGACGGCAATGCCACAACACTGGGTACCCTGACTGCTGATGAATCAAGGTTCA TGCCATGGAAATATATTGAAAGCGAAAAACTGATTTCTGGTGGTAAGCTCAGTATACAGGTGGTAATCGAGGGCGTTTTT GAAAAGCGCCGATTTCTTGATTTGATTCGTTACTTTGTGGTCTATGAAGACAATTATGGCGGTGAAGTCATCAAGAAGAT TGCTGGCTACCATCAGTTTCATGCCGTCAACCGCGCCTTGGCTGAGACCGTGAGAGCAACGGGTGCCAACGGTGACCGTC GAATTGGTGTGGTCTGGCATACCCAGGGCTCAGGTAAGAGCCTCACCATGGCATTTTATGCCGGGCGTGTCGTGCAATCC GCTGCGATGGAAAATCCGACAGTGTTGGTCATTACAGATCGCAACGATCTCGATGACCAGCTGGCCGGTACCTTTTCGCG CTGCCATGAAATCTTGCGGCAAAACCCGACACAGGCAGAGAACCGCGATGACCTGAAAGAAAAGCTCAAGGTAGCATCAG GTGGCATTATCTTCACGACTGTTCAGAAGTTCTTTCCTGATGAAAAGGGCATGAAGCACCCTTTACTTTCAGACCGGCGC AATATCGTGGTGATTGCCGACGAAGCGCACCGCAGCCAGTATAGCTTCGGTGCACGCGTGGTTGACGTCAAAGGTGCCAG TGGCCAGGTTGAAGGCAAAGAGATCACTTATGGTTTCGCTCAGCATATGCGCGACGCTTTGCCCAACGCCAGTTTCATCG GCTTTACCGGCACGCCGATTGAGTTATCAGACAAGAATACACGCGCAGTGTTCGGTGAATACATATCGGTCTACGATATT CAACGGGCAGTCGAAGACGGCGCCACAGTGCGGATTTACTACGAAAGCCGTCTCGCCAAGATTGCACTCGATGAGAAAGA ACGCCCGAAGCTCGACGCTGACTTTGAAGAGGTGACAGAGGGCGAAGAAGACCTCAAAAAAGAGAAGCTGAAATCGCGTT GGGCTCAGCTCGAAGCACTGGTCGGTGCGCCTAAGCGGGTAAAGTTGATTGCTGAAGATATTGTTCGCCATTGGGAAGGC AGAAAGGCAGCCATGAAAGGCAAGGCTATGATTGTCTGTATGAGCCGTCGCATCTGCGTCGATATGTACAATGCAATTGT CAAGATTCGCCCAAACTGGCACAGCGAAAATGACGCCGAAGGTTCAATCAAGATTATCATGACGGGCTCGGCCAGTGATC CGGCTGAGTATCAACCCCATGTGCGCAGTAAACAGCGCCGTGAAGACATGGCAAAGCGTTTCAAGAAATCAGCAGATTCT CTTGAGATCGTCATTGTCAGGGACATGTGGCTGACGGGCTTCGATGCCCCGTGCGCCCACACCATGTACGTCGACAAACC GATGAAGGGCCACGGCCTGATGCAGGCCATAGCCCGCGTTAACCGGGTGTTTGAAGATAAGAAAGGTGGCTTGGTTGTCG ACTACCTTGGCCTTGCTGACAGCCTCAAGTCTGCCTTAGCCAATTACACCGACAGTGGCGGCGAAGGTAAGCCCACATTC GACCAGGACGATGCCGTTGCCGTGATGCTAGAGAAATATGAAATCTGCTGCGGTCTATTCCACGGCTTCGACTGGACTAA ATTCAAGAGTGGTTCGCCTGCAGAACGTTTGGGCATCATGCCTCTGGCTCAAGAACATATCCTATCCCAAAAAGATGGTG CAGAGCGGCTGATTCAGCATGTCGCAGAGCTAACAAATGCCATGGCACTGGCGATGCCGCATGATGAAGCAAAGAAAATT GTCGAGGATGTCGCATTCTTTCAAGCAATCAAAGCTGTTTTGACCAAGCCCACAACAAGACAGGCCAGGACCGAAGAGGA TATGAACCGGGCAATTCAGCAGATTATCTCCCGCGCACTGGTCTCAGATGAGGTCATTGATGTATTCAGGGCGGCCGGGC TTAAGAAGCCCGATGTCAGTATTCTCTCCGATGAGTTCCTCATGGAAATTCAGGGCATGAAGCATAAGAACCTGGCTATC GAACTATTACGCCGTCTGCTCAATGACGAAATCAAAACCCGTGGTCAACGCAACGTCGTTGAATCCCGCTCGTTCTCTAA GATGCTCGAAGATGCGATACAGAAATATAAGAACCGTGCAATCGAGACGGTACAAGTGATCGAAGAACTGATCAAGCTCG CGAAAGAACTTCGTGACGCCCATGCCCGCGGAGAACAACTCGGCCTGACAGAAGACGAGATGGCTTTTTACGATGCTCTT GAGGTAAGCGACTCGGCAGTGAAAATCATGGGCGACAAGGTTCTCAGCGAGATTGCGCGCGAGCTCGTTAAATCGATCAA AGCAAACGTCTCTATCGATTGGACGGTTCGTGAGAACGTGCGGGCCAAGCTGCGAACCGTCGTGAAGCGCATTCTGCGCC AGAGTGGCTATCCGCCAGACAAGCAAGAGAAGGCTGTCGAGACTGTACTTGAGCAGGTGGAGAGATTATCTGAGCAGTGG GCGGTGGCATGA Protein sequence : MPTAKVNEDLLEQAALQWFKEQGYTHIHGSTIAPGEPAAERESFEEVVLSGRIRDALARINPTLSTEVIDEAHKQLMRMD APTCLINNRTFHRYVTDGISVSYSKNGDERVEPVKIIDFEKPENNDWLVVNQFAIIAKPYHRRPDIIVFLNGLPLVVFEL KNMVGAPTVADAYRQLQTYKAQIPKLFNYNELMVVSDGNATTLGTLTADESRFMPWKYIESEKLISGGKLSIQVVIEGVF EKRRFLDLIRYFVVYEDNYGGEVIKKIAGYHQFHAVNRALAETVRATGANGDRRIGVVWHTQGSGKSLTMAFYAGRVVQS AAMENPTVLVITDRNDLDDQLAGTFSRCHEILRQNPTQAENRDDLKEKLKVASGGIIFTTVQKFFPDEKGMKHPLLSDRR NIVVIADEAHRSQYSFGARVVDVKGASGQVEGKEITYGFAQHMRDALPNASFIGFTGTPIELSDKNTRAVFGEYISVYDI QRAVEDGATVRIYYESRLAKIALDEKERPKLDADFEEVTEGEEDLKKEKLKSRWAQLEALVGAPKRVKLIAEDIVRHWEG RKAAMKGKAMIVCMSRRICVDMYNAIVKIRPNWHSENDAEGSIKIIMTGSASDPAEYQPHVRSKQRREDMAKRFKKSADS LEIVIVRDMWLTGFDAPCAHTMYVDKPMKGHGLMQAIARVNRVFEDKKGGLVVDYLGLADSLKSALANYTDSGGEGKPTF DQDDAVAVMLEKYEICCGLFHGFDWTKFKSGSPAERLGIMPLAQEHILSQKDGAERLIQHVAELTNAMALAMPHDEAKKI VEDVAFFQAIKAVLTKPTTRQARTEEDMNRAIQQIISRALVSDEVIDVFRAAGLKKPDVSILSDEFLMEIQGMKHKNLAI ELLRRLLNDEIKTRGQRNVVESRSFSKMLEDAIQKYKNRAIETVQVIEELIKLAKELRDAHARGEQLGLTEDEMAFYDAL EVSDSAVKIMGDKVLSEIARELVKSIKANVSIDWTVRENVRAKLRTVVKRILRQSGYPPDKQEKAVETVLEQVERLSEQW AVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 49 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 48 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 48 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 48 |
