Gene Information

Name : Turpa_2323 (Turpa_2323)
Accession : YP_006440473.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Resistance
Product : ABC transporter related protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2399143 - 2399853 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: mxa:MXAN_2430 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR:

DNA sequence :
ATGCATATCATCTCGATGACCAACGTTCGCAAAGATTACCCGCTCGGCGAAACCACGGTCAGCGCGCTCAAGGGTGTTAA
CTTCGCGGTCGAGGCGGGTGACCTGCTCTCGGTGGTGGGGCCCTCGGGTAGCGGCAAGACGACTCTGCTCAACATCATCG
GCTGTATCGACCGCCCGACGAGCGGCAAGGTTTCAATTGCAGGCCAGGACATCACGACGATGAGCGACGATGCGCTCACC
GACCTGCGCCTTTACACGGTCGGGTTTATTTTCCAGACGTTCAACCTGATCCCGGTGCTCGATGTGCTCGAGAACGTGGA
GTTCCCGATGCTGCTGATGAAAGATAACAAGTTCTCGAAAGCTGAAATCAAAGAGCGTGCCGAGCACCTGATCGAAGAGG
TGGGCCTGACCGCACAGCTGAAGCAGCGCCCGGCGGAGCTCTCGGGTGGGCAGCGGCAGCGCGTCGCGATTGCGCGTGCG
CTCGTGACCAACCCCAAGATCGTGCTCGCCGACGAGCCGACGGCCAACCTCGATTCAGACACGGGCCACAAGATTCTCGA
ACTGATGCGCCGACTGAATGAACAGCATAAGACGACGTTTGTATTCTCGACGCACGACCCCGACGTGCTGCAGTATGCTC
GCCATGTTGTAAAAATTCGTGACGGGCTTGTCGTGGCCGACAAGCCCGTCACGAAAAAAAGAAAAAAATGA

Protein sequence :
MHIISMTNVRKDYPLGETTVSALKGVNFAVEAGDLLSVVGPSGSGKTTLLNIIGCIDRPTSGKVSIAGQDITTMSDDALT
DLRLYTVGFIFQTFNLIPVLDVLENVEFPMLLMKDNKFSKAEIKERAEHLIEEVGLTAQLKQRPAELSGGQRQRVAIARA
LVTNPKIVLADEPTANLDSDTGHKILELMRRLNEQHKTTFVFSTHDPDVLQYARHVVKIRDGLVVADKPVTKKRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_2323 YP_006440473.1 ABC transporter related protein CP001581.1.gene798.p Protein 7e-41 43
Turpa_2323 YP_006440473.1 ABC transporter related protein NC_008702.1.4606598. Protein 3e-38 43
Turpa_2323 YP_006440473.1 ABC transporter related protein NC_012469.1.7686878. Protein 2e-42 42
Turpa_2323 YP_006440473.1 ABC transporter related protein CP001581.1.gene598.p Protein 3e-37 41