Gene Information

Name : Turpa_1640 (Turpa_1640)
Accession : YP_006439794.1
Strain : Turneriella parva DSM 21527
Genome accession: NC_018020
Putative virulence/resistance : Virulence
Product : thiol peroxidase (atypical 2-Cys peroxiredoxin)
Function : -
COG functional category : -
COG ID : -
EC number : 1.11.1.5
Position : 1649139 - 1649645 bp
Length : 507 bp
Strand : -
Note : PFAM: Redoxin; COGs: COG2077 Peroxiredoxin; HAMAP: thiol peroxidase; InterPro IPR013740; KEGG: cte:CT0754 thiol peroxidase; PFAM: Redoxin; SPTR: Probable thiol peroxidase

DNA sequence : 
ATGGCAAATGTAACACTTCGTGGCAAAGAGATTCACACCGTCGGCACCCTGCCCCCAATCGGCAGCAATGTACCCGATTT
TCGCCTCACCAAACAAGACCTGTCTGAAATTAAGCCGGCAGACCTTGCTGGCAAAAAGGTCATCTATAACATATTCCCCA
GCATCGACACAGCGACCTGCGCGGCGTCTGTGCGCAAATTCAACGAGCAGGCGGCGGCGGTTGAGAACACCACCATCGTC
TGCGTCTCTGCCGATCTGCCGTTCGCGCTCAAGCGCTTCTGCGGCGCAGAAGGTATAAACAATGTCGTCGCTGCATCTGA
TCTTCGCGACAAAAGCTTTGGCAAAGTCTGGGGGCTCACCTTTACCGATGGTCCCCTCGAAGGCCTGCTTTCCCGCGCAG
TCGTTGTCACTGACACCAACGGAAAAGTCGTTTATACCGAGCAAGTTGCCGAAATTGGCAACGAACCCGATTACGACAAA
GCCCTCGCCGCCGCGAAGGGCGCGTAA

Protein sequence : 
MANVTLRGKEIHTVGTLPPIGSNVPDFRLTKQDLSEIKPADLAGKKVIYNIFPSIDTATCAASVRKFNEQAAAVENTTIV
CVSADLPFALKRFCGAEGINNVVAASDLRDKSFGKVWGLTFTDGPLEGLLSRAVVVTDTNGKVVYTEQVAEIGNEPDYDK
ALAAAKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-31 41
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 8e-31 41
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-30 41
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Turpa_1640 YP_006439794.1 thiol peroxidase (atypical 2-Cys peroxiredoxin) VFG0087 Protein 3e-31 41