|
Name : Turpa_1507 (Turpa_1507) Accession : YP_006439661.1 Strain : Turneriella parva DSM 21527 Genome accession: NC_018020 Putative virulence/resistance : Unknown Product : Integrase catalytic region Function : - COG functional category : - COG ID : - EC number : - Position : 1510165 - 1510986 bp Length : 822 bp Strand : + Note : PFAM: Integrase core domain; InterPro IPR001584; KEGG: nmu:Nmul_A2405 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; manually curated DNA sequence : GTGAATCAGGTAGCGGATGTATTGCGCGTATCTCGATCCAACCTCTATGAAAGCTTGAAATCCTCACGACGCGGAAATAA AACCGACCAGACGGTAGATGAACGAGTACTGCCGGAAATCCGACGCATCTGTGATGAAAGACCGACTTACGGGTATAGAC GCGTGACAGCAATGCTCAACAAAACCCTTGAAAAACAAGGCTTTTCACGCGTGAATAAGAAGCGCGTCTACCGATTGATG AAGGTGCACCAGTTGCTGCTGCAAAAAGTTGCAAGCCGTCGCACCCTTGTGCATGATGGCAGAATCATCACGGCGAAAAG TGACGTGCGCTGGTGCATGGATATATTTGGCGTGCTTACCTGGGATGGCACTCACGTCTGGGTGGCGTTTGTTCTGGATT GCCACGATCGGCAAGTCATCAATCACTTTAGCAGCACCGTCGGCATCGACGGTCTGAACATTCGCGACATGCTGCTCGGT GCAGTCGAAGAGCGCTTTGGCAAGGCTGAATGCCCACACACCATTCAACTGCTCAGTGATAATGGCCCACAATTCACGAG CCGTGAAACGGTTCATTTTGCATCTTCCATCGGCTTTCAAGTCTGCACGACGCCTGCCTATAGCCCTGAAAGCAACGGTA TGGCCGAAGCATTTGTGAAAACATTCAAGCGCGATTACGTTTACATAAATCGCCTTGAATCCGCGTGGAAAGTAATGCCG CAGATTTCAGACTGGATGCATGACTACAACCATCATGCGCCCCATAAAGGCTTGAAGATGCGTTCGCCGGTTGAATACAG GAACCTAATGGCAGCAGGTTAA Protein sequence : MNQVADVLRVSRSNLYESLKSSRRGNKTDQTVDERVLPEIRRICDERPTYGYRRVTAMLNKTLEKQGFSRVNKKRVYRLM KVHQLLLQKVASRRTLVHDGRIITAKSDVRWCMDIFGVLTWDGTHVWVAFVLDCHDRQVINHFSSTVGIDGLNIRDMLLG AVEERFGKAECPHTIQLLSDNGPQFTSRETVHFASSIGFQVCTTPAYSPESNGMAEAFVKTFKRDYVYINRLESAWKVMP QISDWMHDYNHHAPHKGLKMRSPVEYRNLMAAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| c5197 | NP_757045.1 | transposase insD | Not tested | PAI II CFT073 | Protein | 3e-30 | 42 |
| unnamed | CAC39283.1 | hypothetical protein | Not tested | LPA | Protein | 7e-41 | 42 |
| insD | YP_854263.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 5e-31 | 41 |
| insD | AAZ04432.1 | IS2 transposase | Not tested | PAI I APEC-O1 | Protein | 4e-31 | 41 |
