Gene Information

Name : ykoD (Cp162_0753)
Accession : YP_006436902.1
Strain : Corynebacterium pseudotuberculosis Cp162
Genome accession: NC_018019
Putative virulence/resistance : Unknown
Product : HMP/thiamine import ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 783224 - 784624 bp
Length : 1401 bp
Strand : +
Note : -

DNA sequence :
ATGGCCCCTCAAATTTATGCGCGAGATTTTGGGTATCGTCACTCCAGCCGCCTCAAGCATGCTTTGCAAGGTCTTAACTT
TGAGGTAGAGCGGGGGGAACGCATCCTCTTACTCGGAGCATCGGGTGCAGGAAAATCTACGCTACTTTCAGCTCTGGCAG
GTGTGTTAGGCGCTGATGAAGGGGAGGGGGAAGGAACTCTTAAGGTTCATGCGACACCTGGGATGGTGTTGCAGGACCCG
GATTCCCAGGTCATTTCCTCGCGGGTGGGGGACGACGTGGCATTTGGCTGCGAAAACCTCCGCCTTCCTAAGGACGAGAT
ATGGCGCCGTGTGCCTATAGCATTGGACCACGTTGGTTTGCGGCTGCCTTTAGACCATCCCACCGCATTGCTGTCGGGGG
GACAAAAACAGCGGCTCGCGCTGGCAGGAGTACTTGCTATGGGCGCTGACTTGCTGCTTCTCGACGAGCCCACCGCCAAC
CTCGACCCTCAGGGAGTCCGCGACGTAGTGGCAGCGGTGGAAACTGCTGTAGATGCCACCAATGCCACAGTAATAATTAT
TGAGCACCGCGTGGATACCTGGCTTGAATTTGTTGACCGTATCATCGTGCTGGGCGATGAAGGAAGCATTATCGCTGATG
CCCCAGCCGATACAGTGATTTCTCAGTACGGGGAGGAACTGGCGCGAGGGGGCGTATGGGTGCCTGGTCATGATCCTCTC
CTGCCCTTGGCACAACCAGTAATCTCATCTGCGGAGAATGCACTGACAACTCATTCTTTAGCCACGGGATGGGATTCTCC
TGTACAAAGCTCGTTGGATCTTGCCCTCCCTAGGGGCTTTTCGACTGTATTAACCGGAGTTAACGGAGCTGGAAAAACAA
CAACTTTACTCACGCTTGCTGGGTTACTTCCGCCCCTAGGAGGGGAAGTCCGGGTGAATCGTGAGATCGCCGGAAAACTC
GGCCCTCACCCCTATAAATGGTCCTCGACGTCGCTTGCTGCACGCATGGGATATGTTTTTCAAGATCCCGAGCACCAGTT
TGTGGCTAAAACGGTGAGGGAGGAACTTCTTGTTGGCGCAGGGAGTGGACAAACGCCTAAGCCCGAAGCACATCGCCGCG
CAGACGCTCTCCTAGAGAAGCTTCGCCTGGATCACTTGGCAGAAGCAAATCCTTTTACGCTGTCAGGAGGACAAAAACGC
CGGCTTTCTGTGGCCACTATTTTGGTGAATACACCTAGCGTGGTGTTTTTGGATGAACCGACTTTTGGTCAAGATCGTCG
CACTTTTACCGAGCTTGTGCTGCTATTGCGTCAGCTCACGGACGCTGGGACTACGGTGGTTTCCATTACTCACGATCCGT
TGTATCGCGCGGCGCTAGGAGACAAGGAGATTCAGCTATGA

Protein sequence :
MAPQIYARDFGYRHSSRLKHALQGLNFEVERGERILLLGASGAGKSTLLSALAGVLGADEGEGEGTLKVHATPGMVLQDP
DSQVISSRVGDDVAFGCENLRLPKDEIWRRVPIALDHVGLRLPLDHPTALLSGGQKQRLALAGVLAMGADLLLLDEPTAN
LDPQGVRDVVAAVETAVDATNATVIIIEHRVDTWLEFVDRIIVLGDEGSIIADAPADTVISQYGEELARGGVWVPGHDPL
LPLAQPVISSAENALTTHSLATGWDSPVQSSLDLALPRGFSTVLTGVNGAGKTTTLLTLAGLLPPLGGEVRVNREIAGKL
GPHPYKWSSTSLAARMGYVFQDPEHQFVAKTVREELLVGAGSGQTPKPEAHRRADALLEKLRLDHLAEANPFTLSGGQKR
RLSVATILVNTPSVVFLDEPTFGQDRRTFTELVLLLRQLTDAGTTVVSITHDPLYRAALGDKEIQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0906 YP_005159998.1 ABC transporter ATP-binding protein Not tested Not named Protein 8e-108 66