|
Name : gabD (Cp162_0638) Accession : YP_006436790.1 Strain : Corynebacterium pseudotuberculosis Cp162 Genome accession: NC_018019 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 662623 - 664110 bp Length : 1488 bp Strand : + Note : - DNA sequence : ATGACTGACGGTTCAAAAGAGAACAAGATTATGCAGACGACGCTCCCCGAGGGCGCACCTACGCAGCTCTTTCTCGGCGG CGAGTTCACCGATGGACATGAGGGAGAAACCTTTGAAGTCCTGAATCCTTCCGATGGCAGCATCCTGGCTCGGGTGGCGT CGGCAAGCAAACATGATGCGGAGGAGGCACTGAGTAAGGCCGCGAAAGCGCAGCCATTGTGGGCAGCTACTTCGGCGCGC GAGCGCTCAGACGTTCTGTGGAATGCCTACAAATCTCTTCTAGAGAACTCGGAAAAGTTAGCTGTGATTCAATCACTGGA ATTGGGTCGTGCATTGCCTGATTCACGCGCAGAGGTTGCATATGCGGCGGAGTTTTTTCGATGGTTTGCGGAGGAGGCCG TAAGAATACGGGGAGACTATCGGCATAGTCCCACTGGAAACTCACGATTGATTGTTCATCAACAACCGGTGGGAGTGTCT CTGGCCATCACTCCATGGAATTTCCCCTTAGCTATGGGAACCCGCAAGCTGGGGCCAGCGTTGGCCGCCGGATGCACAAT GATCCTCAAACCCGCATCTAAAACCCCTTTGACCATGCTTTATCTGGCGCGCATTCTCAAAGAATCAGGGCTTCCGGAGG GTGTGGTTTCTGTCTTACCCACAGCGGATTCTTCGGTGATTTCTGATCTGCTGGATGATCCACGGTTACGCAAGCTCACC TTCACAGGCTCGACTGAAGTCGGGCAAAAACTTGCGGCACGCGCTGCTCAACATTCCATGAAAGTATCCTTAGAGCTTGG CGGGAATGCGCCGTATATGGTGATGGAAGATGCGGACATATCTGTTGCAGCTCAGGCCGTTGCCACAGCCAAGATGCGCG GGGCCGGGCAGGTATGTATTGCTGCCAACAGGTTCTTGGTTCATGAATCGATTAAAGACGAGTTTTTAGACCGTGTTATT GACACCATGAAATCCTTTACTCAAGGACCCGCAACACAAGAGGGCGTGGATTTTGCTGCTCTTTCTGGTGCAGATCAGCT AGAAAAGGTTACTGAGCTTGTTAACGACGCCCTCGCTCACGGTGCTACTCGGGGTCTGGGAGAATCGCTGCCGGCAGGAC TTCCAGAGGGCGGTTTTTACTATCCGGCGACGGTGCTAGACAACGTACCTCTAGACGCTCGTATTGTTCATGAAGAAATA TTTGGTCCCGTGGTTGCTATCTCCACCTTCAGGGATGATGAGGAAGCCATAGCGATGGCTAATAACACTCCCTTCGGATT AGCCGCATATGTATTCAGCGAACAGATAACACATGCCTTGAGCGTCGCTGAGCGCGTTGAGGCCGGCATGGTGGGCGTTA ATAAAGGCGGGATTTCAGACCCCTCCGCCCCCTTTGGCGGAATCAAAGAATCAGGTGTAGGGCGAGAAGGCGGTTTTGAA GGGATCCACGAATTCCTAGAGTCAAAGCTCATTGCTTTGCCTCTTTAA Protein sequence : MTDGSKENKIMQTTLPEGAPTQLFLGGEFTDGHEGETFEVLNPSDGSILARVASASKHDAEEALSKAAKAQPLWAATSAR ERSDVLWNAYKSLLENSEKLAVIQSLELGRALPDSRAEVAYAAEFFRWFAEEAVRIRGDYRHSPTGNSRLIVHQQPVGVS LAITPWNFPLAMGTRKLGPALAAGCTMILKPASKTPLTMLYLARILKESGLPEGVVSVLPTADSSVISDLLDDPRLRKLT FTGSTEVGQKLAARAAQHSMKVSLELGGNAPYMVMEDADISVAAQAVATAKMRGAGQVCIAANRFLVHESIKDEFLDRVI DTMKSFTQGPATQEGVDFAALSGADQLEKVTELVNDALAHGATRGLGESLPAGLPEGGFYYPATVLDNVPLDARIVHEEI FGPVVAISTFRDDEEAIAMANNTPFGLAAYVFSEQITHALSVAERVEAGMVGVNKGGISDPSAPFGGIKESGVGREGGFE GIHEFLESKLIALPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 2e-114 | 53 |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-84 | 45 |
